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. 2021 Jul 6;135:104634. doi: 10.1016/j.compbiomed.2021.104634

Table 2.

Six FDA approved drugs which show stable binding with RBD. Drugs are listed according to their average MM-GBSA scores. 10 frames from the last 50ns of trajectories were considered for the calculation of average MM-GBSA interaction energy.

Drug bank ID Generic name Best Receptor ID XP score kcal/mol MM-GBSA (After Docking) kcal/mol MM-GBSA (Simulation) kcal/mol
DB00644 Gonadorelin 1 −9.4 −53.1 −68.2 ± 7.8
DB00569 Fondaparinux 3 −8.5 −32.0 −63.2 ± 11.4
DB01076 Atorvastatin 2 −7.3 −39.1 −56.1 ± 3.1
DB03147 FAD 1 −10.6 −54.3 −49.7 ± 7.7
DB08818 Hyaluronic acid 2 −10.5 −40.9 −44.4 ± 4.6
DB06813 Pralatrexate 1 −8.02 −37.9 −37.6 ± 4.6