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. 2021 Jun 5;7(3):386–413.

Supplement Table 4. All somatic single nucleotide variant identified in discovery cohort.

Sample NR7 NR5 NR4 NR8 R1 R3 NR6 NR1 R4 R2 NR2 R5 NR3
CDS 112 202 276 19 189 10 48 61 152 335 155 320 87
synonymous_SNP 30 53 59 5 49 6 24 17 38 92 38 91 28
missense_SNP 69 136 194 12 126 4 24 38 97 211 100 208 48
stopgain 12 6 15 1 4 0 0 5 13 18 11 11 7
stoploss 0 1 1 0 1 0 0 0 0 1 0 1 0
unknown 1 6 7 1 9 0 0 1 4 13 6 9 4
intronic 219 389 359 50 348 53 267 144 330 497 245 628 100
UTR3 13 39 34 2 22 3 14 3 18 35 14 33 11
UTR5 16 22 20 3 18 0 8 2 13 26 17 37 12
splicing 6 9 10 1 5 0 1 2 5 10 6 9 4
ncRNA_exonic 13 19 10 6 16 1 12 12 17 22 4 21 9
ncRNA_intronic 20 33 45 27 37 21 48 24 32 47 25 46 19
ncRNA_UTR3 0 0 0 0 0 0 0 0 0 0 0 0 0
ncRNA_UTR5 0 0 0 0 0 0 0 0 0 0 0 0 0
ncRNA_splicing 0 1 0 0 0 0 0 0 1 1 0 0 0
upstream 10 11 14 3 9 2 15 2 14 19 8 37 2
downstream 3 3 0 1 8 1 6 3 3 3 2 10 5
intergenic 126 122 126 82 133 87 110 101 124 136 100 146 72
Total 539 852 897 195 787 178 529 354 709 1131 577 1288 322