TABLE 1.
Preservation evaluation between GSE74629 and GSE15932 with regarding to the nine gene modules extracted from GSE74629 by weighed gene co-expression network analysis (WGCNA).
| ID | Color | Module size | Preservation | ||
|---|---|---|---|---|---|
| Z-score | Cor | p value | |||
| Module 1 | black | 93 | 1.792942 | 0.12 | 0.25 |
| Module 2 | blue | 206 | 8.285475 | 0.31 | 5.80E-06 |
| Module 3 | brown | 163 | 3.119733 | 0.08 | 0.31 |
| Module 4 | green | 132 | 3.42939 | 0.26 | 0.0026 |
| Module 5 | grey | 323 | 8.777289 | -0.53 | 8.60E-25 |
| Module 6 | pink | 88 | 2.10382 | -0.06 | 0.58 |
| Module 7 | red | 106 | 2.981962 | 0.16 | 0.1 |
| Module 8 | turquoise | 275 | 12.063853 | 0.27 | 5.60E-06 |
| Module 9 | yellow | 160 | 7.446963 | 0.071 | 0.37 |
In general, a higher value of preservation Z score represents better module stability. The module was considered as stable with 5 < Z score <10 while the module had a good robustness with Z score >10. Cor: gene expression correlation.