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. 2021 May 12;1(1):100008. doi: 10.1016/j.crmeth.2021.100008
REAGENT or RESOURCE SOURCE IDENTIFIER
Deposited data

10X 5′ GEX + VDJ-seq of healthy human PBMCs https://support.10xgenomics.com/single-cell-vdj/datasets vdj_v1_hs_pbmc
10X 5′ GEX + VDJ-seq of healthy human PBMCs https://support.10xgenomics.com/single-cell-vdj/datasets vdj_v1_hs_pbmc2
10X 5′ GEX + VDJ-seq of healthy human PBMCs https://support.10xgenomics.com/single-cell-vdj/datasets vdj_v1_hs_pbmc3
10X 5′ GEX + VDJ-seq of human NSCLC sample https://support.10xgenomics.com/single-cell-vdj/datasets vdj_v1_hs_nsclc
10X 5′ GEX + VDJ-seq of healthy mouse PBMCs https://support.10xgenomics.com/single-cell-vdj/datasets vdj_v1_mm_c57bl6_pbmc
10X 5′ GEX + VDJ-seq of healthy mouse PBMCs https://support.10xgenomics.com/single-cell-vdj/datasets vdj_v1_mm_balbc_pbmc

Software and algorithms

DoubletFinder https://www.sciencedirect.com/science/article/pii/S2405471219300730#sec4 https://github.com/chris-mcginnis-ucsf/DoubletFinder
Seurat https://www.nature.com/articles/nbt.3192 https://github.com/satijalab/seurat
MLtiplet This paper https://github.com/rbr1/MLtiplet