Table 2.
Precompiled RNA libraries available in catRAPID omics v2.0
| Transcriptome (Ensembl 101) | ||||||||
|---|---|---|---|---|---|---|---|---|
| Protein-coding | Long non-coding | Small non-coding | Circular RNAs (CircAtlas 2.0) | |||||
| Model organism | Total | With orthologs | Total | With orthologs | Total | With orthologs | Total | With orthologs |
| Homo sapiens | 19 175 | 17 684 | 16 523 | 1001 | 4912 | 1785 | 9997 | 6678 |
| Mus musculus | 20 823 | 20 053 | 8779 | 999 | 5162 | 2535 | 10714 | 9452 |
| Drosophila melanogaster | 13 286 | 7452 | 2445 | - | 601 | 18 | - | - |
| Caenorhabditis elegans | 19 929 | 7270 | 1583 | - | 6933 | 6 | - | - |
| Saccharomyces cerevisiae | 6523 | 2819 | 16 | - | 61 | 3 | - | - |
| Rattus norvegicus | 20 894 | 19 758 | 2828 | 281 | 4662 | 2829 | 8202 | 7735 |
| Danio rerio | 24 628 | 18 383 | 2164 | 50 | 1169 | 438 | - | - |
| Xenopus tropicalis | 16 429 | 14 158 | 76 | 5 | 973 | 845 | - | - |
| Total | 141 687 | 107 577 | 34 414 | 2336 | 24 473 | 8459 | 28913 | 23 865 |