TABLE 4.
Characteristics of completely sequenced plasmids carrying cfr(B), cfr(C), or cfr(D) genes
cfr gene | Plasmid | Origin | Size (bp) | Colocated resistance gene(s) | GenBank accession no. |
---|---|---|---|---|---|
cfr(B) | Plasmid 2 | E. faecium, human, Netherlands | 293,851 | LR135358 | |
cfr(C) | pCd13_cfrC | C. difficile, human, Greece | 6,961 | aphA3 | MH229772 |
pTx-40 | C. coli, cattle, USA | 48,048 | aphA3, ΔaadE, hph, tet(O) | KX686749 | |
pN61925F | C. coli, cattle, USA | 48,049 | aphA3, ΔaadE, hph, tet(O) | MK541989 | |
pN61740F | C. coli, cattle, USA | 48,049 | aphA3, ΔaadE, hph, tet(O) | MK541988 | |
pN46788F | C. coli, cattle, USA | 50,413 | aphA3, ΔaadE, hph, tet(O) | MK541987 | |
pSH89 | C. coli, pig, China | 57,366 | aphA3, tet(O) | CP047217 | |
pJZ_1_79 | C. coli, pig, China | 62,417 | aphA3, tet(O) | CP047213 | |
cfr(D) | p15-307-1_02 | E. faecium, human, France | 103,074 | erm(A)-like, erm(B), optrA | CP044318 |
pM17/0314 | E. faecium, human, Ireland | 103,600 | erm(A)-like, erm(B), optrA | MN831413 | |
pBP5067_P1 | E. faecium, human, India | 122,126 | optrA, erm(B), vanA gene cluster (vanRSHAXYZ) | CP059807 | |
pBA17124_P1 | E. faecium, human, India | 130,516 | optrA, erm(B), vanA gene cluster (vanRSHAXYZ) | CP059785 |