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. 2021 May 6;49(W1):W80–W85. doi: 10.1093/nar/gkab325

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© The Author(s) 2021. Published by Oxford University Press on behalf of Nucleic Acids Research.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Figure 1. — The CeLaVi user interface, loaded with the Ciona intestinalis gastrula dataset. The main areas of the interface are labelled: (A) tree file input; (B) cell coordinates file input; (C) cell annotations file input; (D) gene expression file input; (E) lineage viewer; (F) 3D viewer; (G) cell annotations table; (H) cell lineage tree controls; (I) clones controls; (J) 3D cells controls; (K) tree depth area. Cells show cell fates with a colour code based on the cell annotations table. For more details visit the tutorial (http://www.celavi.pro/tutorial.html).