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. 2021 Jul 6;36(1):1357–1369. doi: 10.1080/14756366.2021.1916010

Table 2.

Glide XP docking scores and CovDock affinity scores of the compounds using type I and type II docking constraints.

  Reversible
Covalent
Type I
Type II
Type I
Type II
docking score (XP) MM/GBSA
dG Bind
docking score (XP) MM/GBSA
dG Bind
cdock affinity MM/GBSA
dG Bind
cdock affinity MM/GBSA
dG Bind
1 −8.499 −54.71 −8.519 −57.99 −8.693 −61.64 −6.249 −37.79
2 −8.132 −50.83 −7.819 −55.61 −8.233 −34.65 −6.685 −36.06
3 −6.134 −28.08 −7.312 −24.51 −6.981 36.11
4 −8.213 −52.36 −7.034 −42.78 −8.188 −35.80 −6.140 −47.58
5 −8.210 −53.75 −4.216 −46.44 −8.141 −37.61 −5.607 −24.69
6 −8.135 −52.37 −7.225 −38.32 −8.269 −45.84 −6.819 −27.79
7 −8.309 −55.48 −8.360 −51.57 −8.045 −50.49 −7.748 6.62
8 −8.193 −51.5 −6.560 −39.76 −8.046 −36.68 −6.685 −43.60
9 −8.052 −53.51 −5.437 −36.13 −8.183 −37.85 −6.176 −34.18
10 −8.204 −50.87 −6.788 −53,12 −8.626 −41.35 −6.855 −34.79
11 −8.236 −57.97 −7.176 −20.02 −7.897 −42.24 −7.804 46.15
12 −7.926 −52.70 −6.785 −44.62 −8.186 −40.35 −6.525 −48.47
13 −8.278 −57.06 −7.075 −42.91 −8.024 −52.93 −7.111 −32.16
14 −8.209 −51.36 −8.301 −40.16 −5.758 −29.96
15 −8.221 −52.12 −4.795 −2.46 −8.369 −37.02 −6.363 −47.81
16 −8.281 −51.63 −6.784 −41.76 −7.457 −45.26 −6.289 −43.93
17 −8.369 −54.02 −8.464 −45.79 −5.367 −44.99
18 −8.143 −50.91 −6.521 −41.23 −8.197 −46.33 −6.542 −41.71
19 −7.935 −53.14 −7.953 −57.54 −7.890 −41.16 −6.452 −44.63
20 −8.063 −54.70 −7.505 −54.38 −8.308 −34.01 −6.735 −32.73
21 −8.019 −51.92 −7.732 −54.85 −8.000 −28.22 −7.221 −34.68
22 −7.929 −54.38 −6.722 −49.94 −7.823 −39.63 −6.360 −18.93
23 −8.200 −50.17 −6.152 −36.16 −8.344 −39.62 −6.480 −35.48
24 −8.227 −55.40 −7.714 −60.28 −8.504 −42.35 −7.072 −33.41
25 −8.093 −50.90 −6.606 −53.61 −8.256 −41.14 −7.077 −35.23
26 −8.206 −50.79 −6.501 −54.63 −8.601 −40.48 −6.242 −32.12
27 −8.425 −56.44 −6.836 −56.88 −8.533 −48.12 −6.750 −34.59
28 −8.289 −58.79 −7.046 −44.12 −8.837 −48.69 −6.608 −33.40
29 −8.196 −58.01 −6.252 −43.46 −8.228 −49.88 −7.206 −28.65
30 −8.315 −58.44 −4.182 −47.12 −8.667 −50.57 −5.632 −36.95
31 −8.132 −54.03 −4.606 −41.29 −8.560 −51.83 −6.300 −34.00
32 −8.500 −61.06 −6.732 −15.06 −8.626 −45.56 −6.887 9.84
33 −8.341 −57.21 −6.865 −48.23 −7.404 −50.21 −6.634 −39.94
34 −8.195 −54.00 −8.28 −43.08 −8.134 −44.49 −7.360 −27.69
35
36 −7.700 −37.08 −6.352 −48.78 −7.495 −25.07 −6.765 −27.60
37 –5.623 –26.39 –6.764 –32.26
38 –5.975 12.70

Calculated binding energies are provided for both, the reversible and covalent MIF-ligand complexes.