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. 2021 Apr 9;49(12):e69. doi: 10.1093/nar/gkab219

Table 1.

Calculation of the average distance travelled by rightward replication forks emanating from the IZ located in 5′ of DMDTet. The 5′ IZ was considered to be fully efficient. Replication fork velocity was assumed to be constant throughout S-phase. fS1, fS2, fS3 and fS4 replication timing values correspond to the percentage of BrdU-labelled DNA relative to total S-phase in S1, S2, S3 and S4 fractions, respectively, at the position of the 5′ IZ (data from Figure 1F in (46); average percentage from two independent experiments). vRF, velocity of rightward forks

Parameter Value Comments
Doubling time 552 min Data from Supplementary Figure 1G in ref. (46)
% of cells in S phase 69.4 Data from Supplementary Figure 1H in ref. (46)
Estimated S-phase duration 383 min = % of cells in S phase*doubling time
Median velocity of rightward forks emanating from the IZ located in 5′ of DMDTet 2.1 kb/min vRF; see Supplementary Figure S1B
Theoretical distance travelled by rightward forks emanating from the IZ located in 5′ of DMDTet starting in S1 804 kb dS1 = 1*S-phase duration*vRF
S2 603 kb dS2 = 0.75*S-phase duration*vRF
S3 402 kb dS3 = 0.5*S-phase duration*vRF
S4 201 kb dS4 = 0.25*S-phase duration*vRF
% of rightward forks emanating from the IZ located in 5′ of DMDTet starting in S1 2.2 fS1; data from Figure 1F in ref. (46)
S2 6.2 fS2; data from Figure 1F in ref. (46)
S3 26.2 fS3; data from Figure 1F in ref. (46)
S4 65.4 fS4; data from Figure 1F in ref. (46)
Average distance travelled by rightward forks emanating from the IZ located in 5′ of DMDTet 292 kb = dS1*fS1+dS2*fS2+dS3*fS3+dS4*fS4