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. 2021 Jun 30;22(13):7071. doi: 10.3390/ijms22137071

Table A1.

Evaluation of the structural quality of the modeled structures.

Quality Parameters Membrane Protease SRBD Nsp14 TMPRSS2
Template 6VXX 7KJR.A 5C8S.B 7MEQ.1.A
RMSD (Å) from template 0.6 0.8 0.8
QMEAN −5.68 −1.12 −2.15 −0.51
GMQE 0.19 0.88 0.93 0.53
MolProbity score 2.21 0.72 2.59 1.24
Ramachandran favoured (%) 92.93 96.59 95.98 95.03
Ramachandran outliers (%) 2.02 0.00 0.38 0.29
Rotamer outliers (%) 0.00 0.00 15.87 0.68
Bad bonds 0/808 1/1454 3/4338 0/2766
Bad angles 17/1094 7/1981 69/5900 20/3766

Notes: Nsp14-non-structural protein 14; SRBD-spike receptor binding domain; TMPRSS2-transmembrane protease, serine 2.