Table 2.
Distribution of the 52 satDNAs constituting the satellitome of C. gigas on the chromosomes of two genome assembly datasets.
| Assembly Accession: GCA_902806645.1 | Assembly Accession: GCA_011032805.1 | |||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| satDNA | LINKAGE GROUP | No. of Chromosomes Occupied |
No. of Monomers on Chromosomes |
No. of Monomers on Unplaced Scaffolds |
Average No. of Monomers Per Chromosome | satDNA | CHROMOSOME | No. of Chromosomes Occupied |
No. of Monomers on Chromosomes |
Average No. of Monomers Per Chromosome | ||||||||||||||||||
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | |||||||||
| CgiSat01 | + | + | + | + | + | + | + | + | + | + | 10 | 28,120 | 3946 | 2812 | CgiSat01 | + | + | + | + | + | + | + | + | + | + | 10 | 28,486 | 2849 |
| CgiSat02 | + | + | + | + | + | + | + | + | + | + | 10 | 6499 | 1249 | 650 | CgiSat02 | + | + | + | + | + | + | + | + | + | + | 10 | 5563 | 556 |
| CgiSat03 | + | + | + | + | + | + | + | + | + | + | 10 | 2502 | 411 | 250 | CgiSat03 | + | + | + | + | + | + | + | + | + | + | 10 | 2116 | 212 |
| CgiSat04 | + | + | + | + | + | + | + | + | + | + | 10 | 223 | 32 | 22 | CgiSat04 | + | + | + | + | + | + | + | + | + | + | 10 | 198 | 20 |
| CgiSat05 | + | + | + | + | + | + | + | + | + | + | 10 | 1811 | 312 | 181 | CgiSat05 | + | + | + | + | + | + | + | + | + | + | 10 | 1553 | 155 |
| CgiSat06 | + | + | + | + | + | + | + | + | + | + | 10 | 1628 | 202 | 163 | CgiSat06 | + | + | + | + | + | + | + | + | + | + | 10 | 1574 | 157 |
| CgiSat07 | + | + | + | − | + | + | + | + | + | + | 9 | 55 | 11 | 6 | CgiSat07 | + | + | + | + | + | + | + | + | + | + | 10 | 48 | 5 |
| CgiSat08 | + | + | + | + | + | + | + | + | + | + | 10 | 5171 | 1030 | 517 | CgiSat08 | + | + | + | + | + | + | + | + | + | + | 10 | 4949 | 495 |
| CgiSat09 | + | + | + | + | + | + | + | + | + | + | 10 | 4411 | 406 | 441 | CgiSat09 | + | + | + | + | + | + | + | + | + | + | 10 | 4609 | 461 |
| CgiSat10 | + | + | + | + | + | + | + | + | + | + | 10 | 1082 | 328 | 108 | CgiSat10 | + | + | + | + | + | + | + | + | + | + | 10 | 1463 | 146 |
| CgiSat11 | − | + | − | − | + | − | + | − | − | − | 3 | 83 | 50 | 28 | CgiSat11 | + | − | + | + | + | − | + | − | − | − | 5 | 150 | 30 |
| CgiSat12 | − | + | + | − | + | + | − | + | + | − | 6 | 244 | 21 | 41 | CgiSat12 | + | + | + | + | + | − | + | + | − | + | 8 | 672 | 84 |
| CgiSat13 | − | + | + | + | + | + | + | + | + | + | 9 | 39 | 2 | 4 | CgiSat13 | + | + | − | + | + | − | + | + | + | − | 7 | 39 | 6 |
| CgiSat14 | + | + | + | + | + | + | + | + | + | + | 10 | 441 | 119 | 44 | CgiSat14 | + | + | + | + | + | + | + | + | + | + | 10 | 257 | 26 |
| CgiSat15 | + | + | + | + | + | + | + | + | + | + | 10 | 1768 | 163 | 177 | CgiSat15 | + | + | + | + | + | + | + | + | + | + | 10 | 1897 | 190 |
| CgiSat16 | − | + | + | + | + | + | + | + | + | + | 9 | 66 | 1 | 7 | CgiSat16 | + | + | + | + | − | + | − | − | + | − | 6 | 34 | 6 |
| CgiSat17 | + | + | + | + | + | + | + | + | + | + | 10 | 1619 | 309 | 162 | CgiSat17 | + | + | + | + | + | + | + | + | + | + | 10 | 1153 | 115 |
| CgiSat18 | + | + | + | + | + | + | + | + | + | + | 10 | 363 | 25 | 36 | CgiSat18 | + | + | + | + | + | + | + | + | + | + | 10 | 372 | 37 |
| CgiSat19 | + | + | + | + | + | + | + | + | + | + | 10 | 947 | 352 | 95 | CgiSat19 | + | + | + | + | + | + | + | + | + | + | 10 | 1304 | 130 |
| CgiSat20 | − | + | + | − | + | + | + | + | + | − | 7 | 148 | 54 | 21 | CgiSat20 | + | − | − | − | + | + | + | + | − | − | 5 | 245 | 49 |
| CgiSat21 | + | + | + | + | + | + | + | + | + | + | 10 | 542 | 109 | 54 | CgiSat21 | + | + | + | + | + | + | + | + | + | + | 10 | 505 | 51 |
| CgiSat22 | − | − | − | + | − | − | − | − | − | − | 1 | 45 | 0 | 45 | CgiSat22 | − | − | − | − | − | − | − | + | − | − | 1 | 31 | 31 |
| CgiSat23 | + | + | + | + | + | + | + | + | + | − | 9 | 78 | 14 | 9 | CgiSat23 | + | + | + | + | + | + | + | + | + | + | 10 | 148 | 15 |
| CgiSat24 | + | + | + | + | + | + | + | + | + | + | 10 | 2740 | 128 | 274 | CgiSat24 | + | + | + | + | + | + | + | + | + | + | 10 | 2829 | 283 |
| CgiSat25 | + | + | + | + | + | + | + | + | + | + | 10 | 2468 | 67 | 247 | CgiSat25 | + | + | + | + | + | + | + | + | + | + | 10 | 2983 | 298 |
| CgiSat26 | − | − | − | − | − | − | − | + | − | − | 1 | 13 | 0 | 13 | CgiSat26 | − | − | − | + | − | − | − | − | − | − | 1 | 15 | 15 |
| CgiSat27 | − | + | + | + | + | − | + | + | + | − | 7 | 2030 | 57 | 290 | CgiSat27 | + | − | + | + | + | − | + | + | − | + | 7 | 1554 | 222 |
| CgiSat28 | + | + | + | + | + | + | + | + | + | + | 10 | 487 | 167 | 49 | CgiSat28 | + | + | + | + | + | + | + | + | + | + | 10 | 548 | 55 |
| CgiSat29 | + | + | + | + | + | + | + | + | + | + | 10 | 277 | 19 | 28 | CgiSat29 | + | + | + | + | + | + | + | + | + | + | 10 | 267 | 27 |
| CgiSat30 | − | − | − | + | − | + | − | − | − | − | 2 | 2 | 1 | 1 | CgiSat30 | − | − | − | − | + | − | − | + | − | − | 2 | 4 | 2 |
| CgiSat31 | + | − | − | − | − | − | − | − | − | − | 1 | 52 | 0 | 52 | CgiSat31 | − | − | − | − | − | − | + | − | − | − | 1 | 61 | 61 |
| CgiSat32 | − | + | + | − | + | + | − | − | − | − | 4 | 147 | 0 | 37 | CgiSat32 | + | − | − | − | − | − | + | − | − | − | 2 | 75 | 38 |
| CgiSat33 | − | + | + | + | + | + | + | + | + | + | 9 | 3191 | 254 | 355 | CgiSat33 | − | + | − | + | + | + | + | + | + | + | 8 | 2789 | 349 |
| CgiSat34 | − | + | − | − | − | − | − | + | + | + | 4 | 12 | 2 | 3 | CgiSat34 | + | + | − | + | + | + | + | + | + | + | 9 | 43 | 5 |
| CgiSat35 | − | + | − | − | + | + | − | − | − | + | 4 | 6 | 0 | 2 | CgiSat35 | − | − | + | − | − | − | + | − | − | − | 2 | 4 | 2 |
| CgiSat36 | + | − | − | − | − | − | − | − | − | − | 1 | 2 | 57 | 2 | CgiSat36 | − | − | − | − | + | + | + | − | − | + | 4 | 96 | 24 |
| CgiSat37 | + | + | + | + | + | + | + | + | + | + | 10 | 6367 | 516 | 637 | CgiSat37 | + | + | + | + | + | + | + | + | + | + | 10 | 6242 | 624 |
| CgiSat38 | + | + | − | + | − | + | − | + | − | − | 5 | 6 | 0 | 1 | CgiSat38 | + | − | + | − | − | + | − | + | + | − | 5 | 10 | 2 |
| CgiSat39 | + | + | + | + | + | + | + | + | + | + | 10 | 1617 | 64 | 162 | CgiSat39 | + | + | + | + | + | + | + | + | + | + | 10 | 1235 | 124 |
| CgiSat40 | + | + | + | + | + | + | + | + | + | + | 10 | 402 | 31 | 40 | CgiSat40 | + | + | + | + | + | + | + | + | + | + | 10 | 402 | 40 |
| CgiSat41 | − | + | − | − | − | − | − | − | − | − | 1 | 11 | 0 | 11 | CgiSat41 | + | − | − | − | − | − | − | − | − | − | 1 | 7 | 7 |
| CgiSat42 | + | + | + | − | + | + | + | + | − | − | 7 | 124 | 31 | 18 | CgiSat42 | + | − | + | + | + | − | + | − | − | − | 5 | 104 | 21 |
| CgiSat43 | + | + | + | + | + | + | + | + | + | + | 10 | 3145 | 380 | 315 | CgiSat43 | + | + | + | + | + | + | + | + | + | + | 10 | 3416 | 342 |
| CgiSat44 | + | + | + | + | + | + | + | + | + | + | 10 | 54 | 2 | 5 | CgiSat44 | + | + | + | + | + | + | + | + | + | + | 10 | 80 | 8 |
| CgiSat45 | − | + | − | − | − | − | − | − | − | − | 1 | 1 | 11 | 1 | CgiSat45 | + | − | − | − | − | − | − | − | − | − | 1 | 4 | 4 |
| CgiSat46 | + | − | − | − | + | − | − | − | − | + | 3 | 25 | 0 | 8 | CgiSat46 | − | + | − | + | + | + | − | + | + | − | 6 | 359 | 60 |
| CgiSat47 | + | + | + | − | + | + | − | + | + | − | 7 | 251 | 79 | 36 | CgiSat47 | + | − | + | + | + | + | + | + | + | + | 9 | 340 | 38 |
| CgiSat48 | − | − | + | + | + | + | + | + | − | + | 7 | 20 | 4 | 3 | CgiSat48 | + | + | + | + | − | + | − | − | − | + | 6 | 10 | 2 |
| CgiSat49 | + | + | + | + | + | + | + | + | + | + | 10 | 77 | 4 | 8 | CgiSat49 | + | + | + | + | + | + | + | + | + | + | 10 | 79 | 8 |
| CgiSat50 | − | − | − | − | − | − | − | − | − | − | 0 | 0 | 0 | 0 | CgiSat50 | − | − | − | − | − | − | − | − | − | − | 0 | 0 | 0 |
| CgiSat51 | − | − | − | + | − | + | − | − | − | − | 2 | 122 | 0 | 61 | CgiSat51 | − | + | − | − | − | − | − | + | − | − | 2 | 87 | 44 |
| CgiSat52 | + | − | − | − | − | − | − | − | − | − | 1 | 17 | 0 | 17 | CgiSat52 | − | − | − | − | − | − | + | − | − | − | 1 | 6 | 6 |
For each satDNA, presence (+) or absence (−) and total number of monomers present on chromosomes and unplaced scaffolds are indicated.