TABLE 1.
Nucleotide and amino acid differences between VOCs and ancestral isolatesa
Reaction | Genome position |
nt |
aa |
|||||||
---|---|---|---|---|---|---|---|---|---|---|
nt | aa | WT | B.1.1.7 | B.1.351 | P.1 | WT | B.1.1.7 | B.1.351 | P.1 | |
nPCR C | 21765–21770 | 69–70 | ACATGT | del | ACATGT | ACATGT | HV | del | HV | HV |
21801 | 80 | A | A | C | A | D | D | A | D | |
21974 | 138 | G | G | G | T | D | D | D | Y | |
21991–21993 | 144 | TTA | del | TTA | TTA | Y | del | Y | Y | |
nPCR D | 23012 | 484 | G | G | A | A | E | E | K | K |
23063 | 501 | A | T | T | T | N | Y | Y | Y | |
23271 | 570 | C | A | C | C | A | D | A | A |
WT, Wuhan-Hu-1 strain (GenBank accession number MN908947). This strain was first detected in the UK (B.1.1.7), South Africa (B.1.351), or Brazil (P.1). Single-letter amino acid codes are used. Changes from the WT sequence are italicized and underlined. Primers for nPCR reactions are shown in Table S1 in the supplemental material. Abbreviations: nt, nucleotides; aa, amino acids.