TABLEĀ 2.
Sample name | IMG taxon ID | Contig size (Mb) | No. of CRISPR elements | Predicted count |
% of CDSs assigned to database (% of total) |
|||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CDSs (million) | 16S rRNA | 18S rRNA | 23S rRNA | 28S rRNA | 5S rRNA | tRNAs | COGs | TIGRFAM | Pfam | KEGG | ||||
Lox_West_1 | 3300038551 | 2,859.7 | 391 | 4.413 | 943 | 2 | 1,559 | 8 | 384 | 18,675 | 67 | 15 | 63 | 39 |
Lox_West_2 | 3300038408 | 2,204.4 | 250 | 3.412 | 742 | 8 | 1,209 | 14 | 377 | 19,124 | 65 | 14 | 63 | 39 |
Lox_West_3 | 3300038552 | 3,396.0 | 458 | 5.245 | 1,084 | 8 | 1,735 | 12 | 560 | 29,892 | 64 | 14 | 62 | 38 |
Lox_West_4 | 3300038469 | 2,949.2 | 420 | 4.534 | 957 | 5 | 1,612 | 9 | 529 | 27,020 | 65 | 14 | 62 | 39 |
Lox_West_5 | 3300038470 | 2,061.2 | 242 | 3.218 | 722 | 6 | 1,292 | 11 | 384 | 18,675 | 66 | 15 | 63 | 40 |
Lox_North_1 | 3300038409 | 1,293.3 | 339 | 1.994 | 574 | 15 | 973 | 22 | 289 | 13,655 | 65 | 14 | 62 | 39 |
Lox_North_2 | 3300038421 | 1,408.6 | 372 | 2.189 | 644 | 16 | 1,029 | 20 | 292 | 14,843 | 65 | 14 | 62 | 39 |
Lox_North_3 | 3300038558 | 1,761.8 | 255 | 2.818 | 877 | 11 | 1,432 | 9 | 382 | 19,094 | 65 | 14 | 62 | 41 |
Lox_North_4 | 3300038550 | 1,460.0 | 171 | 2.333 | 736 | 9 | 1,209 | 13 | 345 | 16,512 | 65 | 14 | 62 | 40 |
Lox_North_5 | 3300038422 | 1,161.4 | 145 | 1.860 | 589 | 9 | 978 | 12 | 268 | 12,534 | 66 | 14 | 62 | 40 |
Lox_South_1 | 3300038401 | 571.3 | 58 | 1.011 | 454 | 21 | 863 | 33 | 150 | 4,992 | 67 | 14 | 63 | 44 |
Lox_South_2 | 3300038549 | 1,139.7 | 137 | 1.977 | 622 | 15 | 1,187 | 27 | 237 | 10,120 | 67 | 14 | 63 | 42 |
Lox_South_3 | 3300038402 | 653.7 | 83 | 1.159 | 421 | 18 | 854 | 33 | 140 | 5,752 | 68 | 14 | 64 | 44 |
Lox_South_4 | 3300038403 | 750.8 | 105 | 1.286 | 465 | 14 | 895 | 20 | 174 | 6,767 | 67 | 14 | 63 | 43 |
Lox_South_5 | 3300038663 | 950.1 | 87 | 1.589 | 493 | 5 | 911 | 7 | 190 | 8,662 | 68 | 14 | 64 | 42 |
Lox_East_1 | 3300038454 | 1,852.5 | 219 | 2.803 | 691 | 11 | 1,041 | 15 | 334 | 16,789 | 65 | 15 | 63 | 39 |
Lox_East_2 | 3300038455 | 1,891.4 | 259 | 2.879 | 678 | 10 | 1,158 | 20 | 322 | 17,682 | 65 | 15 | 63 | 39 |
Lox_East_3 | 3300038431 | 1,551.8 | 156 | 2.396 | 615 | 8 | 1,020 | 12 | 249 | 13,642 | 66 | 15 | 64 | 40 |
Lox_East_4 | 3300038410 | 1,529.8 | 208 | 2.359 | 557 | 8 | 942 | 12 | 246 | 14,059 | 65 | 14 | 62 | 39 |
Lox_East_5 | 3300038468 | 1,431.5 | 196 | 2.232 | 581 | 13 | 966 | 18 | 271 | 12,773 | 64 | 14 | 61 | 38 |