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. 2021 Jul 9;16(7):e0240948. doi: 10.1371/journal.pone.0240948

Table 1. Estimates of average ± Standard Deviation (SD) for five decision metrics derived from ten replicates of 10-fold cross-validation results created by 10 Genomic Prediction (GP) methods.

GP method Sensitivity Specificity Precision Decision accuracy AUC
RR 0.86±0.03 0.83±0.02 0.89±0.02 0.85±0.01 0.76±0.05
BGLR 0.66±0.03 0.83±0.03 0.86±0.02 0.75±0.02 0.94±0.00
LR 0.51±0.06 0.5±0.06 0.51±0.07 0.50±0.05 0.51±0.04
PLR 0.86±0.04 0.88±0.05 0.89±0.05 0.87±0.03 0.97±0.02
ANN 0.91±0.03 0.90±0.03 0.90±0.04 0.90±0.02 0.99±0.02
RF 0.98±0.02 0.93±0.02 0.94±0.02 0.96±0.01 1.00±0.01
GBM 0.99±0.05 0.89±0.04 0.89±0.04 0.91±0.04 1.00±0.02
SVM 0.61±0.06 0.97±0.04 0.99±0.02 0.67±0.05 0.94±0.04
NB 0.94±0.03 0.74±0.06 0.78±0.06 0.84±0.04 0.91±0.04
KNN 0.79±0.06 0.83±0.06 0.83±0.05 0.81±0.03 0.47±0.06