Table 2.
Phage strain | Host | attP sequence (5′– > 3′) | attB sequence (5′– > 3′) | Integration locus |
---|---|---|---|---|
SPβ | B. subtilis 168 | ACAGATAA/AGCTGTAT | ACAGATAA/AGCTGTAT | spsM |
H2 | B. amyloliquefaciens H | CCCTATAAATAACTA | CCCTATAAATAACTA | Intergenic |
H2 | B. subtilis 168 | CCCTATAAATAACTA* | CCCttTAaAAATAACTA* | Intergenic* |
φ3T | B. subtilis 168 | aaaatgacataCCTACtgtgttttta | gctatgcggttCCTACctttgtcgtt | kamA |
Goe11 | B. subtilis ∆6 | aaaatgacataCCTACtgtgtttttt* | gctatgcggttCCTACctttgtcgtt* | kamA* |
Goe12 | B. subtilis ∆6 | ACAGATAA/AGCTGTAT* | ACAGATAA/AGCTGTAT* | spsM* |
Goe13 | B. subtilis ∆6 | ACAGATAA/AGCTGTAT* | ACAGATAA/AGCTGTAT* | spsM* |
The SPβ att sites were oriented based on Abe et al., 2017 [52]. Capital letters represent the inverted repeat recognised by SprA, a forward slash indicates the cleavage site, and underlined italic letters represent the 3' overhangs. The att sites of φ3T are presented as described by Suzuki et al., 2020 [55]. Capital letters indicate the conserved core, and lowercase letters indicate the associated imperfect repeat sequences. The att site sequences and integration loci marked with a star (*) are based on personal bioinformatic investigations and have not been confirmed experimentally.