Table 7.
Statistics of the best refined docked TLR5 and vaccine complex. Strong protein interaction expressed in arbitrary units (a.u.) is represented by smallest HADDOCK score.
Vaccine-TLR5 | |
---|---|
HADDOCK score (a.u.) | − 259.8 ± 3.1 |
Cluster size | 20 |
RMSD from the overall lowest-energy structure (Å) | 0.3 ± 0.2 |
Van der Waals energy (kcal mol−1) | − 182.2 ± 4.2 |
Electrostatic energy (kcal mol−1) | − 514.1 ± 25.7 |
Desolvation energy (kcal mol−1) | 25.1 ± 6.0 |
Restraints violation energy (kcal mol−1) | 1.1 ± 0.39 |
Buried surface area (Å2) | 5358.9 ± 45.0 |