TABLE 1.
The detailed information of 72 MADS-box genes identified in foxtail millet genome.
| Gene Name | Transcript name | Chr | Pfam | Nucleotide length (bp) | Amino acid length (aa) | pI | MW (kDa) | Intron number | Subfamily |
| SiMADS01 | Seita.1G003500.1 | 1 | PF00319; PF01486 | 1425 | 474 | 8.73 | 53.18 | 7 | SOC1(TM3) |
| SiMADS02 | Seita.1G072200.1 | 1 | PF00319; PF01486 | 750 | 249 | 6.14 | 28.11 | 5 | Bsisiter |
| SiMADS03 | Seita.1G077600.1 | 1 | PF00319 | 966 | 321 | 5.94 | 34.22 | 0 | M |
| SiMADS04 | Seita.1G148200.1 | 1 | PF00319 | 441 | 146 | 4.76 | 16.05 | 1 | M |
| SiMADS05 | Seita.1G183300.1 | 1 | PF00319 | 777 | 258 | 7.72 | 27.48 | 0 | M |
| SiMADS06 | Seita.1G209300.1 | 1 | PF00319; PF01486 | 723 | 240 | 8.85 | 27.45 | 7 | AGL17 |
| SiMADS07 | Seita.1G272300.1 | 1 | PF00319 | 693 | 230 | 8.68 | 24.24 | 0 | M |
| SiMADS08 | Seita.1G273400.1 | 1 | PF00319; PF01486 | 762 | 253 | 8.85 | 28.81 | 7 | AGL6 |
| SiMADS09 | Seita.1G308200.1 | 1 | PF00319; PF01486 | 729 | 242 | 9.27 | 27.64 | 7 | AGL17 |
| SiMADS10 | Seita.1G328500.1 | 1 | PF00319; PF01486 | 687 | 228 | 5.41 | 25.44 | 7 | SVP |
| SiMADS11 | Seita.2G002300.1 | 2 | PF00319; PF01486 | 810 | 269 | 9.31 | 30.85 | 7 | AP1(SQUA) |
| SiMADS12 | Seita.2G026600.1 | 2 | PF00319 | 1182 | 393 | 5.76 | 43.49 | 1 | M |
| SiMADS13 | Seita.2G086800.1 | 2 | PF00319 | 741 | 246 | 5.64 | 26.81 | 0 | M |
| SiMADS14 | Seita.2G115700.1 | 2 | PF00319 | 333 | 110 | 4.79 | 11.96 | 0 | M |
| SiMADS15 | Seita.2G266600.1 | 2 | PF00319; PF01486 | 729 | 242 | 9.17 | 27.79 | 7 | SEP |
| SiMADS16 | Seita.2G383000.1 | 2 | PF00319; PF01486 | 759 | 252 | 9.11 | 28.53 | 7 | AP1(SQUA) |
| SiMADS17 | Seita.3G055200.1 | 3 | PF00319 | 1434 | 477 | 4.41 | 51.33 | 1 | M |
| SiMADS18 | Seita.3G073000.1 | 3 | PF00319; PF01486 | 867 | 288 | 9.23 | 32.59 | 7 | AG |
| SiMADS19 | Seita.3G098400.1 | 3 | PF00319; PF01486 | 795 | 264 | 9.1 | 29.85 | 6 | AG |
| SiMADS20 | Seita.3G098800.1 | 3 | PF00319; PF01486 | 648 | 215 | 9.34 | 24.66 | 7 | AGL12 |
| SiMADS21 | Seita.3G236800.1 | 3 | PF00319; PF01486 | 648 | 215 | 8.45 | 25.11 | 6 | PI(GLO) |
| SiMADS22 | Seita.3G278000.1 | 3 | PF00319 | 294 | 97 | 4.45 | 10.85 | 1 | M |
| SiMADS23 | Seita.3G280400.1 | 3 | PF00319 | 588 | 195 | 10.25 | 21.22 | 0 | M |
| SiMADS24 | Seita.3G301600.1 | 3 | PF00319 | 471 | 156 | 5.44 | 17.25 | 0 | M |
| SiMADS25 | Seita.3G358100.1 | 3 | PF00319; PF01486 | 735 | 244 | 7.07 | 27.42 | 7 | AP1(SQUA) |
| SiMADS26 | Seita.4G062600.1 | 4 | PF00319; PF01486 | 684 | 227 | 7.59 | 26.22 | 7 | SEP |
| SiMADS27 | Seita.4G077200.1 | 4 | PF00319; PF01486 | 669 | 222 | 5.36 | 24.4 | 6 | SVP |
| SiMADS28 | Seita.4G093200.1 | 4 | PF00319 | 1191 | 396 | 4.99 | 43.22 | 9 | MIKC* |
| SiMADS29 | Seita.4G160200.1 | 4 | PF00319 | 699 | 232 | 10.27 | 25.94 | 2 | M |
| SiMADS30 | Seita.4G163500.1 | 4 | PF00319 | 645 | 214 | 9.59 | 23.2 | 0 | M |
| SiMADS31 | Seita.4G177800.1 | 4 | PF00319 | 552 | 183 | 7.91 | 20.08 | 0 | M |
| SiMADS32 | Seita.4G184600.1 | 4 | PF00319 | 510 | 169 | 5.44 | 18.55 | 0 | M |
| SiMADS33 | Seita.4G219100.1 | 4 | PF00319 | 468 | 155 | 5.11 | 17.11 | 1 | M |
| SiMADS34 | Seita.4G238000.1 | 4 | PF00319 | 960 | 319 | 5.62 | 34.27 | 0 | M |
| SiMADS35 | Seita.4G268200.1 | 4 | PF00319; PF01486 | 717 | 238 | 4.97 | 26.54 | 4 | Bsisiter |
| SiMADS36 | Seita.4G277600.1 | 4 | PF00319; PF01486 | 690 | 229 | 8.74 | 26.11 | 6 | AP3(DEF) |
| SiMADS37 | Seita.5G033100.1 | 5 | PF00319 | 753 | 250 | 9.61 | 27.8 | 0 | M |
| SiMADS38 | Seita.5G036500.1 | 5 | PF00319; PF01486 | 690 | 229 | 7.73 | 25.99 | 6 | AGL17 |
| SiMADS39 | Seita.5G101300.1 | 5 | PF00319; PF01486 | 507 | 168 | 8.9 | 18.66 | 4 | FLC |
| SiMADS40 | Seita.5G114500.1 | 5 | PF00319 | 750 | 249 | 8.59 | 27.84 | 0 | M |
| SiMADS41 | Seita.5G143100.1 | 5 | PF00319; PF01486 | 774 | 257 | 9.07 | 29.07 | 7 | AG |
| SiMADS42 | Seita.5G160200.1 | 5 | PF00319 | 1347 | 448 | 5.25 | 46.65 | 0 | M |
| SiMADS43 | Seita.5G220600.1 | 5 | PF00319 | 552 | 183 | 5.03 | 20.8 | 1 | M |
| SiMADS44 | Seita.5G225300.1 | 5 | PF00319 | 1260 | 419 | 5.89 | 46.71 | 0 | M |
| SiMADS45 | Seita.5G303200.1 | 5 | PF00319; PF01486 | 591 | 196 | 6.55 | 22.68 | 4 | OsMADS32-like |
| SiMADS46 | Seita.5G404600.1 | 5 | PF00319; PF01486 | 630 | 209 | 7.1 | 24.21 | 6 | PI(GLO) |
| SiMADS47 | Seita.5G406700.1 | 5 | PF00319; PF01486 | 810 | 269 | 9.11 | 29.89 | 6 | AG |
| SiMADS48 | Seita.5G424200.1 | 5 | PF00319 | 984 | 327 | 5.18 | 34.94 | 0 | M |
| SiMADS49 | Seita.5G425300.1 | 5 | PF00319 | 1389 | 462 | 5.11 | 49.4 | 0 | M |
| SiMADS50 | Seita.5G432700.1 | 5 | PF00319 | 840 | 279 | 10.58 | 29.46 | 4 | FLC |
| SiMADS51 | Seita.6G013400.1 | 6 | PF00319; PF01486 | 678 | 225 | 6.61 | 25.39 | 6 | AGL12 |
| SiMADS52 | Seita.6G156800.1 | 6 | PF00319; PF01486 | 702 | 233 | 8.89 | 26.76 | 6 | AGL17 |
| SiMADS53 | Seita.6G194800.1 | 6 | PF00319 | 1035 | 344 | 4.58 | 37.43 | 11 | MIKC* |
| SiMADS54 | Seita.6G223400.1 | 6 | PF00319; PF01486 | 738 | 245 | 8.75 | 28.42 | 7 | SEP |
| SiMADS55 | Seita.6G223600.1 | 6 | PF00319 | 528 | 175 | 8.97 | 19.88 | 4 | FLC |
| SiMADS56 | Seita.6G223700.1 | 6 | PF00319 | 372 | 123 | 10.13 | 14.22 | 1 | FLC |
| SiMADS57 | Seita.7G040500.1 | 7 | PF00319 | 456 | 151 | 4.49 | 16.64 | 1 | M |
| SiMADS58 | Seita.7G109700.1 | 7 | PF00319; PF01486 | 609 | 202 | 7.06 | 23.29 | 6 | AGL12 |
| SiMADS59 | Seita.7G110000.1 | 7 | PF00319 | 330 | 109 | 9.94 | 12.49 | 2 | AGL12 |
| SiMADS60 | Seita.7G125400.1 | 7 | PF00319; PF01486 | 717 | 238 | 7.72 | 27.18 | 7 | AGL17 |
| SiMADS61 | Seita.7G210200.1 | 7 | PF00319; PF01486 | 765 | 254 | 8.59 | 28.48 | 7 | AGL6 |
| SiMADS62 | Seita.7G235900.1 | 7 | PF00319; PF01486 | 738 | 245 | 9.27 | 28.01 | 5 | Bsisiter |
| SiMADS63 | Seita.8G182900.1 | 8 | PF00319 | 627 | 208 | 6.21 | 22.05 | 0 | M |
| SiMADS64 | Seita.8G220800.1 | 8 | PF00319 | 1110 | 369 | 6.2 | 40.94 | 10 | MIKC* |
| SiMADS65 | Seita.9G088700.1 | 9 | PF00319; PF01486 | 741 | 246 | 6.45 | 27.88 | 7 | SEP |
| SiMADS66 | Seita.9G088900.1 | 9 | PF00319; PF01486 | 750 | 249 | 9.33 | 28.47 | 7 | AP1(SQUA) |
| SiMADS67 | Seita.9G237300.1 | 9 | PF00319 | 1098 | 365 | 5.03 | 40.09 | 4 | M |
| SiMADS68 | Seita.9G270800.1 | 9 | PF00319 | 1230 | 409 | 5.18 | 43.79 | 1 | M |
| SiMADS69 | Seita.9G342700.1 | 9 | PF00319; PF01486 | 678 | 225 | 9.6 | 25.62 | 6 | SOC1(TM3) |
| SiMADS70 | Seita.9G393900.1 | 9 | PF00319 | 717 | 238 | 5.6 | 26.57 | 0 | M |
| SiMADS71 | Seita.9G513900.1 | 9 | PF00319; PF01486 | 687 | 228 | 8.47 | 25.63 | 7 | SVP |
| SiMADS72 | Seita.9G561000.1 | 9 | PF00319 | 186 | 61 | 10.65 | 6.97 | 0 | SOC1(TM3) |