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. Author manuscript; available in PMC: 2021 Jul 12.
Published in final edited form as: Nat Cancer. 2020 Nov 17;1(11):1041–1053. doi: 10.1038/s43018-020-00141-0

Table 2:

Priorities to accelerate precision medicine in metastatic prostate cancer

Challenges Short Term Goals Longer Term Goals
Challenge 1: Access to tumor tissue for molecular profiling Standardization of protocols for the collection and processing of specimens for genomic profiling
Partnership between oncologists, radiologists, and pathologists regarding optimal techniques and team education
Incorporation of sample processing protocols for future molecular tests (eg., RNA, protein)
Functional imaging to improve diagnosis and biopsy acquisition
Generation of patient-derived prostate cancer models for precision medicine ex-vivo clinical trials.
Challenge 2: Addressing tumor heterogeneity Expanded correlation of liquid biopsies and molecular imaging with single site tumor biopsies at different stages of the disease and under distinct therapeutic contexts
Optimization of ctDNA, CTC, and other liquid biopsy approaches to improve sensitivity to detect common prostate cancer alterations in the circulation including copy number aberrations
Implementation of approaches to capture tumor microenvironment, including immune infiltrates, at different disease states
Integration of multi-omic approaches (eg., genomics with transcriptomics and protein-based functional assays) to provide additional readouts of pathway activation/suppression.
Utilization of functional imaging and liquid biopsies to identify early acquired resistance
Improved understanding of the intersection between tumor genomics and tumor-immune system regulation
Challenge 3: Detection of complex drivers Clinical characterization of not only single gene aberrations, including rare long tail events, but also how co-occurring alterations modulate the predictive value for a biomarker-drug matches
Functional characterization of rare /uncommon molecular alterations and co-occurring lesions in preclinical models
Understanding mechanisms of response and resistance to therapies
Drug discovery for targeting rare aberrations
Clinical-grade tests beyond targeted genomic panels, such as WGS, transcriptomics, methylation
Precision oncology trials focused on gene expression signatures, metabolism, epigenetics, or other non-genomic features
Challenge 4: Clinical and genomic integration Streamline of consent process to facilitate broader sharing of de-identified data
Generation of a prostate cancer specific N=1 database collecting and linking genomic and clinical data from academic and community partners
Institutional or supra-institutional protocols collecting tumor and liquid biopsies for later evaluation of exceptional responders and exceptional non-responders as well as acquired resistance
Harmonization of genomics data coming from different tests for uniform /comparable annotations, reporting, and visualization
Machine-learning approaches to integrate emerging data for genomics-clinical outcome correlations, validation of complex algorithms to prioritize choices of therapies or clinical trials
Developing paradigms for precision oncology based on specific alterations
Challenge 5: Understanding the impact of genomics in diverse patient populations. Partnership with patients, community providers, local health departments, the Veterans administration, and other stakeholders
Improving access to somatic and germline sequencing for all men with advanced prostate cancer, including underserved populations
Point of care educational resources for physicians and patients
New technologies and social media platforms to facilitate partnerships with patients and advocacy groups throughout the process
Provide access of N=1 database to patients/providers beyond academic institutions
Genomic landscape studies focused on previously underrepresented populations
Improved understanding regarding how germline genetics impacts tumor somatic genomic profiles and tumor phenotypes
Elucidation of the interaction between genomic, environmental and lifestyle factors for determining tumor progression and response to therapy
Long term impact on reducing disparities
Challenge 6: Access to matched therapies and clinical trials Decision support and education materials for practitioners and patients
Live and virtual prostate cancer molecular tumor boards to support clinical decision making
Matching of patients with molecularly-defined clinical trials and therapies (eg., via MatchMiner)
Development of a prostate cancer umbrella protocol for research testing of a platform of agents in molecularly selected populations
Early phase trials testing novel molecularly targeted and immune based therapeutic targets and drugs
Repurposing of available drugs for molecularly selected populations (“off-label clinical trials”)
Development of consensus guidelines for stakeholders (insurance companies, health systems) on off-label use
Streamlining N=1 Investigational New Drug processes for compassionate use of unapproved agents