TABLE 4.
Detailed information on Drosophila spike-in RNA-seq libraries used in this studya
| Accession no. | Sample annotation | GEO/SRA data set | Library sizeb | No. of reads mapped to: |
No. of chimeric reads | Ratio of chimeric reads/reads mapped to Drosophila (%)c | |
|---|---|---|---|---|---|---|---|
| Human genome | Drosophila chr4 | ||||||
| SRR4934910 | P493_FlyS2_A | SRP075325 | 19,333,486 | 14,866,599 | 25,994 | 114 | 0.44 |
| SRR4934934 | P493_FlyS2_A | SRP075325 | 20,972,522 | 15,808,054 | 33,233 | 105 | 0.32 |
| SRR4934935 | P493_FlyS2_A | SRP075325 | 20,579,126 | 15,663,884 | 28,772 | 197 | 0.68 |
| SRR4934311 | P493_FlyS2_B | SRP075325 | 23,229,139 | 18,482,501 | 18,498 | 138 | 0.75 |
| SRR4934799 | P493_FlyS2_B | SRP075325 | 20,416,688 | 16,460,316 | 13,049 | 134 | 1.03 |
| SRR4934936 | P493_FlyS2_B | SRP075325 | 21,016,231 | 17,054,532 | 15,935 | 112 | 0.71 |
| SRR4934495 | P493_FlyS2_C | SRP075325 | 26,464,903 | 21,675,460 | 10,466 | 155 | 1.48 |
| SRR4934687 | P493_FlyS2_C | SRP075325 | 21,191,865 | 17,584,755 | 8,330 | 93 | 1.12 |
| SRR4934937 | P493_FlyS2_C | SRP075325 | 17,256,607 | 14,298,342 | 5,587 | 34 | 0.61 |
The library size and the total number of reads mapped to the human genome, chr4 of the Drosophila genome, or human-Drosophila (chr4) chimeric reads are reported.
Library size is the total number of reads in the RNA-seq library.
(No. of chimeric reads/no. of reads mapped to chr4 of Drosophila) × 100.