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. 2021 Jul 12;37(Suppl 1):i237–i244. doi: 10.1093/bioinformatics/btab294

Table 3.

Tenfold cross validation performance on strict split

Model ROC-AUC
K-NN (Baseline) 0.54 ± 0.03
AA CDR3 0.60 ± 0.04
AA full 0.59 ± 0.04
SMI CDR3 0.60 ± 0.06
SMI full 0.59 ± 0.06
Pretrained 0.56 ± 0.04
Pretrained + Aug. 0.59 ± 0.03
Pretrained semifrozen 0.58 ± 0.06
Pretrained semifrozen + Aug. 0.62±0.06

Note: Mean and standard deviation of each model configuration on the VDJ + COVID-19 dataset. Best performance marked in bold.