Table 3.
Tenfold cross validation performance on strict split
Model | ROC-AUC |
---|---|
K-NN (Baseline) | 0.54 ± 0.03 |
AA CDR3 | 0.60 ± 0.04 |
AA full | 0.59 ± 0.04 |
SMI CDR3 | 0.60 ± 0.06 |
SMI full | 0.59 ± 0.06 |
Pretrained | 0.56 ± 0.04 |
Pretrained + Aug. | 0.59 ± 0.03 |
Pretrained semifrozen | 0.58 ± 0.06 |
Pretrained semifrozen + Aug. |
Note: Mean and standard deviation of each model configuration on the VDJ + COVID-19 dataset. Best performance marked in bold.