Table 3.
Tenfold cross validation performance on strict split
| Model | ROC-AUC |
|---|---|
| K-NN (Baseline) | 0.54 ± 0.03 |
| AA CDR3 | 0.60 ± 0.04 |
| AA full | 0.59 ± 0.04 |
| SMI CDR3 | 0.60 ± 0.06 |
| SMI full | 0.59 ± 0.06 |
| Pretrained | 0.56 ± 0.04 |
| Pretrained + Aug. | 0.59 ± 0.03 |
| Pretrained semifrozen | 0.58 ± 0.06 |
| Pretrained semifrozen + Aug. |
Note: Mean and standard deviation of each model configuration on the VDJ + COVID-19 dataset. Best performance marked in bold.