Table 3.

Reference species in SRR12949983 and SRR13132427

SRR12949983	SRR13132427
Escherichia phage C5	Escherichia phage V18
Salmonella phage C2	Escherichia virus FV3
Serratia phage Pila	Escherichia virus JES2013
Escherichia virus E112	Escherichia phage CEC_Kaz_2018
Escherichia virus ECML134	Escherichia phage SECphi18
Escherichia virus T4	Escherichia phage vB_EcoS_PNS1

Note: These species are shown in the associated taxonomic analysis at NCBI SRA. We use them as the ground truth to assign labels to the assembled contigs.