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. 2021 Jul 12;12:4246. doi: 10.1038/s41467-021-24470-5

Table 1.

Genes that share a strong Boolean implication relationship with PRKAB1 on the major continuum paths in IBD (related to Fig. 3C, D).

1A. Epithelial Mesenchymal Transition (EMT) Continuum
CCDC88A IL17B OCLN SIRT1
CDH1 IL23A PARD3 SIRT6
CLDN2 IL6 PML SMAD7
CXCL10 IL6 PPARG SNAI1
ELMO1 ITGA4 PPARGC1A SNAI2
F11R ITGB1 PRKAB1 SPHK1
HIF1A ITGB7 PRKCQ TLR2
HMOX1 JAK1 RIPK2 TLR4
IL12A MADCAM1 S1PR1 VIM
IL17A NOD2 S1PR5
1B. Healing – Fibrosis Continuum
PRKAB1 MRC1 MMP3 S1PR1
PPARG IL33 MMP9 S1PR5
PPP1CA IL6 MMP12 JAK1
PPARGC1A CCL2 MMP13 SMAD7
CCDC88A TNF MMP14 IL17A
PRKCQ COL1A1 IL11 IL17B
ACTA2 TIMP1 ITGA4 IL12A
TGFB1 TIMP2 ITGB1 IL23A
IL10 MMP1 ITGB7 IL6
IL1B MMP2 MADCAM1 RIPK2