Table 1.
Model | Technique | Nucleosome/Histone | PTM | Reference | |
---|---|---|---|---|---|
Cell culture | Lytic | MNase-microarray | Nucleosome | N/A | Oh et al. (2015) |
Cell culture | Lytic | aniPOND-Proteomics | H1.0, H1.1, H1.2, Hist1H2AC, Hist2H2AB, H2AFX, H2AFY, H2AFY2 | N/A | Dembowskiand deLuaca, 2015 |
Cell culture | Lytic | MNase-Frac-Seq | Nucleosome/H3 | N/A | Huet al.(2019) |
Cell culture | Lytic | ChIP-Seq | H3 | K4me3, K9me3, K27me3, K27ac | Dremelet al.(2019) |
Cell culture | Lytic | ATAC-Seq | Nucleosome | N/A | McSwiggen et al. (2019) |
Cell culture | Lytic | ATAC-Seq | Nucleosome | N/A | Dremeland DeLuca.2019 |
Cell culture | Lytic | ChIP-Seq | H3 | K4me3, K9me3, K27me3, K27ac | Gaoet al.(2020) |
Mouse TG | Latent | ChIP-Seq | H3 | K27me3 | Washington et al. (2019) |