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. Author manuscript; available in PMC: 2021 Jul 15.
Published in final edited form as: Comput Math Biophys. 2020 Feb 17;8(1):1–35. doi: 10.1515/cmb-2020-0001

Table 6:

Average Pearson correlation coefficients of least squares fitting Cα B-factor prediction of small, medium, large, and superset using 11Å cutoff. Two Bottleneck (B) and Wasserstein (W) metrics using various kernel choices are included. Results for pFRI are taken from Opron et al[32]. GNM and NMA value are taken from the course grained Cα results reported in Park et al [39].

H
B & W B W pFRI GNM NMA
Exp Lor Both Exp Lor Both Exp Lor Both
Small 0.87 0.84 0.94 0.74 0.72 0.85 0.74 0.73 0.86 0.59 0.54 0.48
Medium 0.68 0.68 0.78 0.62 0.61 0.69 0.60 0.63 0.69 0.61 0.55 0.48
Large 0.61 0.60 0.70 0.54 0.54 0.61 0.51 0.55 0.62 0.59 0.53 0.49
Superset 0.65 0.64 0.73 0.58 0.58 0.65 0.55 0.59 0.66 0.63 0.57 NA