Table 7:
Average Pearson correlation coefficients Cα B-factor predictions for small-, medium-, and large-sized protein sets along with the entire superset of the 364 protein dataset. Gradient boosted tree (GBT), convolutional neural network, and consensus (CON) results are obtained by leave-one-protein-out (blind). The results of parameter-free flexibility-rigidity index (pf-FRI), Gaussian network model (GNM) and normal mode analysis (NMA) were obtained via the least squares fitting of individual proteins.
CNN | GBT | CON | pFRI | GNM | NMA | |
---|---|---|---|---|---|---|
Small | 0.63 | 0.58 | 0.62 | 0.59 | 0.54 | 0.48 |
Medium | 0.60 | 0.58 | 0.61 | 0.61 | 0.55 | 0.48 |
Large | 0.58 | 0.59 | 0.58 | 0.59 | 0.53 | 0.49 |
Superset | 0.60 | 0.59 | 0.61 | 0.63 | 0.57 | NA |