TABLE 5.

Annotations of genes coinciding with the Common Loci listed in Table 4.

Locus ID	Chr	Start	End	GO terms	Annotation descriptions
46	1	10900178	10901419	GO:0042742; GO:0009611 GO:0002213; GO:0000289 GO:0003676; GO:0008408	Defense response to bacterium; response to wounding; defense response to insect; nuclear-transcribed mRNA poly(A) tail shortening; nucleic acid binding; 3′-5′ exonuclease activity
4404	2	42319235	42320043	GO:0048364; GO:0009506 GO:0030308; GO:0019722 GO:0004871; GO:0005515 GO:0009741; GO:0009505	Root development; plasmodesma negative regulation of cell growth; calcium-mediated signaling signal transducer activity; protein binding response to brassinosteroid; plant-type cell wall
6415	3	30379371	30382243	No GO annotation	Closest match (BLASTn, 67.8% identity): Probable serine/threonine-protein kinase DDB_G0282963 [Pyrus × bretschneideri]
8388	4	29259074	29261788	No GO annotation	Closest match (BLASTn, 57.5% identity): Pentatricopeptide repeat-containing protein At4g14190, chloroplastic [Prunus mume]
14093	7	7219073	7222709	GO:0005509; GO:0005634 GO:0009409; GO:0006355 GO:0003677	Calcium ion binding; nucleus response to cold; regulation of transcription, DNA-templated DNA binding
15955	9	16105261	16107681	GO:0003824; GO:0044763 GO:0071704; GO:0044710 GO:0044237	Catalytic activity; single-organism cellular process; organic substance metabolic process; single-organism metabolic process cellular metabolic process