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. Author manuscript; available in PMC: 2021 Jul 16.
Published in final edited form as: Bioorg Med Chem. 2019 Apr 6;27(11):2253–2260. doi: 10.1016/j.bmc.2019.04.010

Table 1.

Properties of protein26 and RNA structures from the PDB.

Liganded Proteins (n = 46,221) Liganded RNAs (n = 300)
Average Median Average Median
Volume (Å) 460 ± 360 350 450 ± 400 280
Buriedness 0.81 ± 0.09 0.81 0.78 ± 0.09 0.77
Hydrophobicity 0.53 ± 0.12 0.52 0.42 ± 0.10 0.41
DLID −0.045 ± 0.81 0.13 −0.38 ± 0.72 −0.27
All Proteins (n = 291,758) All RNAs (n = 1552)
Average Median Average Median
Volume (Å) 270 ± 250 180 290 ± 330 190
Buriedness 0.76 ± 0.08 0.75 0.72 ± 0.08 0.72
Hydrophobicity 0.50 ± 0.11 0.49 0.35 ± 0.10 0.35
DLID −0.70 ± 0.80 −0.84 −1.09 ± 0.77 −1.10