TABLE 2.

Significantly associated single-nucleotide polymorphisms (SNPs) and candidate genes revealed by the genome-wide association study analysis.

SNPa	P-value	Alleleb	MAFc	SNP effectd	Putative candidate gene	Annotation of candidate genes
S1_89238026	9.81 × 10–10	A/G	0.32	0.13	GRMZM2G114893	Zinc finger (C2H2 type) family protein
S1_278132829	7.25 × 10–11	A/T	0.25	0.13	GRMZM2G328500	UDP-glucose 6-dehydrogenase
S3_118933375	1.00 × 10–6	C/T	0.10	−0.17	GRMZM2G144004	Unknown
S3_147594533	1.11 × 10–7	A/T	0.11	0.15	GRMZM2G162250	Zea mays ARGOS6
S4_183913302	2.98 × 10–7	G/C	0.17	0.13	GRMZM2G138949	BTB/POZ domain-containing protein
S10_95231291	1.32 × 10–7	C/A	0.10	−0.16	GRMZM2G131536	Unknown

^aSNP name, chromosome_position, for example, S1_89238026 represents that the SNP is on chromosome 1, and the physical position is 89238026 bp.

^bLetters to the left and right of the “/” refer to major allele and minor allele, respectively.

^cMAF, minor allele frequency.

^dPositive values indicate that the major allele is a resistance allele, and the negative values indicate that the minor allele is a resistance allele.