Table 1.
Gene name | Gene ID | Genomic position (bp) | CDS length (bp) | Exon | Protein length (aa) | MW | pI | Predicted Pfam domain | Subcellular location |
---|---|---|---|---|---|---|---|---|---|
BnLPP1A | BnaA09g18500D | A09:11,485,093–11,486,357 - | 984 | 2 | 327 | 36.9 | 8.35 | PAP2 | PM |
BnLPP1B | BnaC09g20440D | C09:17,421,172–17,423,263 - | 972 | 2 | 323 | 36.6 | 8.64 | PAP2 | PM |
BnLPP1C | BnaA06g35100D | A06:23,178,693–23,179,882 + | 951 | 2 | 316 | 35.5 | 7.20 | PAP2 | ER |
BnLPP2A | BnaC08g39060D | C08:34,977,648–34,979,784 - | 918 | 7 | 305 | 35.6 | 6.13 | PAP2 | PM |
BnLPP2B | BnaA09g45250D | A09:30,966,399–30,968,509 - | 939 | 7 | 312 | 35.2 | 6.18 | PAP2 | PM |
BnLPP3A | BnaC05g48240D | C05:42,805,948–42,809,057 + | 1089 | 8 | 362 | 40.5 | 6.13 | PAP2 | PM |
BnLPP3B | BnaA05g33490D | A05:22,673,065–22,676,351 + | 1089 | 8 | 362 | 40.4 | 6.23 | PAP2 | PM |
BnLPP3C | BnaC03g33070D | C03:20,223,052–20,225,854 + | 966 | 6 | 321 | 36.1 | 6.53 | PAP2 | PM |
BnLPP3D | BnaA03g28040D | A03:13,723,633–13,726,024 + | 966 | 6 | 321 | 36.1 | 6.56 | PAP2 | PM |
BnLPP4A | BnaA05g21920D | A05:16,840,547–16,842,185 - | 918 | 6 | 305 | 34.7 | 8.46 | PAP2 | PM |
BnLPP4B | BnaC05g35130D | C05:34,426,978–34,428,721 - | 918 | 6 | 305 | 34.7 | 8.46 | PAP2 | PM |
In the genomic position, the positive (+) and negative (-) sign indicates the existence of gene on the positive and negative strand of that specific markers, respectively
CDS coding DNA sequences, bp base pair, MW molecular weight, pI isoelectric points, PM plasma membrane, ER endoplasmic reticulum