Table 2.

Featured immune-related GO biological process terms for all comparison groups.

Compared group	GO terms (P < 0.01).
Group SvC-B	Phagocytosis, positive regulation of immune system process, positive regulation of I-kappa B kunase/NF-kappaB signaling, integrin-mediated signaling pathway, regulation of B cell activation, macrophage activation, lymphocyte-mediated immunity
Group SvC-N	Response to lipopolysaccharide, regulation of granulocyte differentiation, toll-like receptor signaling pathway, positive regulation of immune system process, macrophage differentiation, phagocytosis, engulfment, lymphocyte activation, integrin-mediated signaling pathway, leukocyte activation
Group SvS-BvN-D7	Response to lipopolysaccharide, negative regulation of B cell apoptotic process, positive regulation of TOR signaling, macrophage differentiation, endosome to lysosome transport, regulation of granulocyte differentiation, toll-like receptor signaling pathway, defense response to fungus, phagocytosis, engulfment, T cell proliferation, mast cell activation, myeloid cell activation involved in immune response, regulation of T cell differentiation in thymus, phagosome maturation, positive regulation of T cell activation
Group CvC-BvN-D0	Phagocytosis, positive regulation of immune system process, positive regulation of I-kappaB kinase/NF-kappaB signaling, integrin mediated signaling pathway, regulation of B cell activation, lymphocyte mediated immunity, macrophage activation, response to lipopolysaccharide
Group SvI-B&N	Phagocytosis, positive regulation of cell migration, positive regulation of I-kappaB kinase/NF-kappaB signaling, positive regulation of myeloid leukocyte differentiation, integrin-mediated signaling pathway, regulation of B cell activation, leukocyte activation, regulation of immune response, and macrophage activation

The details of the GO terms involved in biological process were listed in Tables S5–S9 .