Table 1.
Whole genome-based comparisons of the novel species to Listeria species with the highest similarity
|
Novel species and subspecies |
isDDH (%)* |
AAI (%)† |
ANI (%)‡ |
Most similar Listeria species |
|---|---|---|---|---|
|
L. cossartiae subsp. cossartiae FSL L7-1447T |
53.6 |
96.8 |
93.4 |
L. marthii FSL S4-120T |
|
L. cossartiae subsp. cayugensis FSL L7-0993T |
52.6 |
97.3 |
94.7 |
L. marthii FSL S4-120T |
|
L. farberi FSL L7-0091T |
46.4 |
95.2 |
91.9 |
L. innocua ATCC 33090T |
|
L. immobilis FSL L7-1519T |
34.3 |
91.9 |
87.4 |
L. ivanovii subsp. londoniensis ATCC 49954T |
|
L. portnoyi FSL L7-1582T |
37.3 |
91.7 |
88.9 |
L. cornellensis FSL F6-0969T |
|
38.0 |
92.2 |
89.2 |
L. newyorkensis M6-0535T |
|
|
L. rustica FSL W9-0585T |
37.6 |
91.7 |
88.7 |
L. cornellensis FSL F6-0969T |
|
37.9 |
92.6 |
88.9 |
L. newyorkensis M6-0535T |
|
|
L. cossartiae subsp. cossartiae FSL L7-1447T§ |
61.5 |
97.5 |
95.2 |
L. cossartiae subsp. cayugensis FSL L7-0993T |
*isDDH, in silico DNA–DNA hybridization.
†AAI, average amino acid identity from two-way analysis.
‡ANI, average nucleotide identity.
§L. cossartiae subspecies comparison performed to support subspecies classification.