Table 2.
Antimicrobial resistance (AMR) genes detected for the genomes of Catabacter hongkongensis strains and Christensenella species
Coverage refers to the proportion of the gene in the reference gene sequence.
|
Strain |
Contig (position strand) |
Reference gene (accession) |
Coverage |
Identity (%) |
Gene product |
Resistance |
|---|---|---|---|---|---|---|
|
‘Christensenella timonensis’ Marseille-P2437 |
FLKP01000002.1 (1477797–1479716 +) |
tet(W) (NG_048299.1) |
1-1920/1920 |
99.53 |
Tetracycline resistance ribosomal protection protein Tet(W) |
Tetracycline |
|
FLKP01000002.1 (1480702–1481922 +) |
tet(40) (NG_048141.1) |
1-1221/1221 |
99.67 |
Tetracycline efflux MFS transporter Tet(40) |
Tetracycline |
|
|
‘Christensenella massiliensis’ Marseille-P2438 |
(142755–144674 −) |
tet(W) |
1-1920/1920 |
100 |
Tetracycline resistance ribosomal protection protein Tet(W) |
Tetracycline |
|
(1980989–1981855 +) |
aadE (NG_047378.1) |
1-867/867 |
99.77 |
Aminoglycoside 6-adenylyltransferase AadE |
Streptomycin |
|
|
Catabacter hongkongensis HKU16T |
(37275–39194 +) |
tet(32) (NG_048125.1) |
1-1920/1920 |
100 |
Tetracycline resistance ribosomal protection protein Tet(32) |
Tetracycline |
|
DSM 22607T |
(54376–56295 +) |
tet(W) (NG_048281.1) |
1-1920/1920 |
100 |
Tetracycline resistance ribosomal protection protein Tet(W) |
Tetracycline |
|
Catabacter hongkongensis ABBA15k |
No AMR genes have been detected in the genome |
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|
‘ Christensenella intestinihominis ’ AF73-05CM02PP |
No AMR genes have been detected in the genome |
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