Table 1.

Sequence datasets analyzed in the present study

Acronym	Description	Reference
TRITEX	Illumina short-read data from multiple library types (paired-end, mate-pair, 10× Chromium); used for hybrid assemblies	Monat et al. (2019)
PE450	Overlapping 2 × 250 reads with an insert size ∼450 bp; used for polishing of long-read assemblies; subset of TRITEX	Monat et al. (2019)
CLR	PacBio continuous long reads; 121× coverage	Jayakodi et al. (2020)
CCS	PacBio circular consensus reads; 27× coverage	This study
ONT	Oxford Nanopore reads; 85× coverage	This study
Hi-C	Chromosome conformation capture sequencing data; used for pseudomolecule construction	Mascher et al., (2017)