TABLE 1.
Change in P. nigra N46 DNA methylation levels among regenerated plants of five generations compared with those of donor plants.
MSAP band type | G0 | G1 | G2 | G3 | G4 | G5 |
I | 442 ± 19 | 488 ± 11 | 613 ± 15 | 616 ± 7 | 646 ± 6 | 631 ± 13 |
II | 194 ± 16 | 151 ± 4 | 98 ± 8 | 86 ± 8 | 66 ± 8 | 85 ± 7 |
III | 213 ± 3 | 204 ± 2 | 153 ± 4 | 166 ± 10 | 155 ± 9 | 167 ± 10 |
IV | 90 ± 3 | 95 ± 8 | 76 ± 6 | 71 ± 7 | 72 ± 3 | 56 ± 8 |
Total | 939 | 938 | 940 | 939 | 939 | 939 |
T (%)a | 52.96 ± 2.05a | 48.03 ± 1.26b | 34.75 ± 1.60c | 34.43 ± 0.71c | 31.20 ± 0.65c | 32.84 ± 1.37c |
F (%)b | 32.27 ± 0.28a | 31.91 ± 0.81a | 24.35 ± 1.07b | 25.24 ± 0.54b | 24.14 ± 1.23b | 23.75 ± 1.89b |
H (%)c | 20.70 ± 1.81a | 16.12 ± 0.46b | 10.40 ± 0.87c | 9.19 ± 0.85c | 7.06 ± 0.87c | 9.09 ± 0.73c |
aTotal methylation level (%) = [(II + III + IV)/(I + II + III + IV)] × 100%. bFully methylation level (%) = [(III + IV)/(I + II + III + IV)] × 100%. cHemi-methylation level (%) = [(II)/(I + II + III + IV)] × 100%. Type I indicated absence of methylation due to the presence of bands in both EcoRI/HpaII and EcoRI/MspI digest; type II bands appeared only in EcoRI/HpaII digestion but not in the EcoRI/MspI digest; type III generated bands obtained in EcoRI/MspI digest but not in the EcoRI/HpaII digest; and type IV represents the absence of band in both enzyme combinations. The different letters after data means significant deferences at P < 0.05.