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. 2021 Jul 7;9:666585. doi: 10.3389/fchem.2021.666585

TABLE 1.

Reported experimental and computational data on monomeric wt αSyn.

Structural features Technique References
Global Local Experimental Computational
Compact, globular structure Electrostatic interactions (120–140 and 30–100 residues) Technique: PRE1 Technique: MD2 Dedmon et al. (2005a)
Spin label MTSL
Cysteine mutations at Q24, S42, Q62, S87 and N103
Brief long-range intramolecular electrostatic interactions Technique: NMR3 Bertoncini et al. (2005)
100uM WT αSyn in buffer (25mM Tris.Cl pH = 7.4/0.1M NaCl)
Extended tendency N-terminal: Helical elements Technique: NMR3 Technique: restrained MD2 Allison et al., 2009
Brief long-range intramolecular electrostatic interactions Solvent: implicit
Compact structure at both neutral and low pH Technique: PRE1 Wu and Baum, (2010)
C- to N-terminal interchain interactions Various pH, concentrations, solvents
Compact structure (low pH) Technique: Single-Molecule FRET4 Technique: constrained excluded volume MC5 Nath et al. (2012)
50 pM solution of double-labeled WT αSyn Technique: All-atom MD2
Solvent: explicit
High-energy phase: Extended random coil Low-energy phase: Extended all-β High-energy phase: Technique: MC5 Jónsson et al. (2012)
N-terminal: Helical elements Solvent: Implicit
Low-energy phase:
N-terminal + NAC + C-terminal (residues 30–100): β-strands
C-terminal: β-structures + random coil
N-terminal + NAC + C-terminal (residues 1–100): Helical elements Technique: REMD6 Coskuner et al., (2013)
Solvents: implicit
Technique: MD2
Solvents: explicit
Compact structure N-terminal: Helical elements + β-hairpin spanning residues 38–53 Technique: coarse-grained MD2 Yu et al. (2015)
Electrostatic interactions (118–130 and 38–53 residues) β-strands: β1 (38–44) and β2 (47–53) Solvent: explicit
α+β NAC: Helical elements
C-terminal: Helical elements + β-structures
Compact, globular structure N-terminal: Helical elements Technique: HS-AFM7 Technique: REX8/DMD9 Zhang et al. (2018)
Tail-like protrusions NAC: Helical elements 50nM WT αSyn in PBS Solvent: Lazaridis-Karplus implicit
All-α C-terminal: Helical elements
Compact, globular structure N-terminal: Helical elements spanning residues 25–55 Techniques: Technique: REX8/DMD9 Brodie et al., 2019
Brief long-range intramolecular NAC: β-structures LD-CL10, CD11,HDX12, Solvent: Lazaridis-Karplus implicit
electrostatic interactions α+β C-terminal: β-structures + random coil LC-MS13/MS Analysis
Compact, globular structure N-terminal: Helical elements Technique: MD2 Bhattacharya et al. (2019)
Tail-like protrusions NAC: Helical elements Solvents: explicit
All-α C-terminal: Helical elements + random coil
N-terminal: Helical elements spanning residues 10–30 and a weak helix centered around residue 50 Technique: NMR3 Kim et al. (2020) (review)
NAC: tendency to form β-structures helix centered around residue 90
1

Paramagnetic Relaxation Enhancement.

2

Molecular Dynamics simulations.

3

Nuclear magnetic resonance.

4

Fluorescence resonance energy transfer.

5

Monte Carlo simulations.

6

Replica Exchange Molecular Dynamics simulations.

7

High-Speed Atomic Force Microscopy.

8

All-atom Replica Exchange.

9

Discrete Molecular Dynamics.

10

Long-distance crosslinking.

11

Circular dichroism.

12

Hydrogen-deuterium exchange.

13

Liquid chromatography–mass spectrometry.