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. 2020 Oct 1;22(4):bbaa219. doi: 10.1093/bib/bbaa219

Table 1.

Method run times per sample (mean +/- standard deviation, in milliseconds)

Whole blood PBMC Simulation
(58 581 genes/sample) (34 694 genes/sample) (11 845 genes/sample)
  LM22 LM6 LM22 LM6 LM22 LM6
DeconRNASeq Inline graphic Inline graphic Inline graphic Inline graphic Inline graphic Inline graphic
CIBERSORT Inline graphic Inline graphic Inline graphic Inline graphic Inline graphic Inline graphic
ssGSEA Inline graphic Inline graphic Inline graphic Inline graphic Inline graphic Inline graphic
SingScore Inline graphic Inline graphic Inline graphic Inline graphic Inline graphic Inline graphic