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. 2021 Jul 15;81(14):2929–2943.e6. doi: 10.1016/j.molcel.2021.05.033
REAGENT or RESOURCE SOURCE IDENTIFIER
Experimental models: Organisms/strains

FreeStyle HEK293-F Cells Thermo Fisher Cat# R79007
HEK293T ATCC RRID: CRL-3216

Chemicals, peptides, and recombinant proteins

Turbofect transfection reagent Thermo Fisher Cat# R0533
polyethyleneimine Polysciences Cat# 24765
protease inhibitor cocktail Roche Cat# 04693124001
DNase Sigma Cat# DN25
RNase Sigma Cat# R4875
PMSF Sigma Cat# P7626
LMNG Anatrace Cat# NG310
CHS Anatrace Cat# CH210
Amphipol A8-35 Anatrace Cat# A835
Adenosine 3′,5′-cyclophosphate Sigma Cat# A9501

Critical commercial assays

QuikChange Lightning Site-Directed Mutagenesis Thermo Fisher Cat# 210518

Recombinant DNA plasmids

pEGA: HCN4ΔC This paper N/A
pEGA: HCN4ΔC (H407A, H553A) This paper N/A
pCI:TRIP8b(1a-4) Porro et al., 2020 N/A
pCI:rbHCN4 Porro et al., 2019 N/A
pCI:rbHCN4 (H407A) This paper N/A
pCI:rbHCN4 (H553A) This paper N/A
pCI:rbHCN4 (E557A) This paper N/A
pCI:rbHCN4 (H407A, H553A) This paper N/A
pCI:rbHCN4 (H407A, H553A, E557A) This paper N/A
pCI:hHCN1 Porro et al., 2019 N/A
pCI:hHCN1 (E436A) This paper N/A
pCI:mHCN2 Porro et al., 2019 N/A

Deposited data

CryoEM map of HCN4holo This paper EMDB: EMD-12513
CryoEM map of HCN4apo/LC This paper EMDB: EMD-12512
CryoEM map of HCN4apo/AM This paper EMDB: EMD-12466
Atomic model ofHCN4holo This paper PDB: 7NP4
Atomic model ofHCN4apo/LC This paper PDB: 7NP3
Atomic model ofHCN4apo/AM This paper PDB: 7NMN

Software and algorithms

RELION-3.0 Zivanov et al., 2018 https://www2.mrc-lmb.cam.ac.uk/relion/index.php/Main_Page
CryoSPARC v.2 Punjani et al., 2017 https://cryosparc.com
PHENIX Adams et al., 2010 https://phenix-online.org
Coot Emsley et al., 2010 https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/
UCSF CHIMERA Pettersen et al., 2004 http://www.cgl.ucsf.edu/chimera
MOLPROBITY Chen et al., 2010 http://molprobity.biochem.duke.edu/
HOLE Smart et al., 1996 http://www.holeprogram.org/
AutoDock 4.2.6 in conjunction with AutoDockTools 1.5.6 Morris et al., 2009 http://autodock.scripps.edu/
GROMACS 2019 Abraham et al., 2015; Van Der Spoel et al., 2005 https://manual.gromacs.org/documentation/2019/index.html#
LINCS Hess et al., 1997 https://dblp.uni-trier.de/rec/journals/jcc/HessBBF97.html
Biotite Kunzmann and Hamacher, 2018 https://github.com/biotite-dev/biotite

Other

Grids Quantifoil Three-hundred mesh holey gold R0.6/1 and R1.2/1.3