Table 7.
Predicted CDPK7 epitopes by CTLpreda.
| Peptide rank | Start positionb | Sequence | Score (ANN/SVM)c | Antigenicity |
|---|---|---|---|---|
| 1 | 280 | EPHPLLARL | 0.83/1.3591088 | 0.0131 |
| 2 | 1716 | WSIGVIMYL | 0.96/1.1120848 | 0.1711 |
| 3 | 1398 | GSSRVFTRC | 0.94/1.0685326 | -0.7197 |
| 4 | 1187 | ARDDDVYER | 0.65/1.3441588 | 0.3493 |
| 5 | 715 | SFPEFKTWL∗ | 0.98/0.95345497 | 1.0485 |
| 6 | 1763 | AKDLIVRML∗ | 0.98/0.89030833 | 0.8096 |
| 7 | 724 | ERNEGILSM∗ | 0.65/1.0757075 | 0.5393 |
| 8 | 470 | ASRFTSAIK∗ | 0.80/0.85963689 | 1.0303 |
| 9 | 1573 | ERELLRSEM∗ | 0.51/1.0720792 | 0.9337 |
| 10 | 1188 | RDDDVYERI | 0.85/0.73017891 | 0.0942 |
| 11 | 1666 | RTPNATIKL | 0.99/0.58481613 | 0.2323 |
| 12 | 32 | KECLKQYLK∗ | 0.99/0.58376856 | 1.2628 |
| 13 | 1411 | WELSKCAEM | 0.19/1.3750392 | 0.3168 |
| 14 | 1749 | VSFDGAVWR∗ | 0.96/0.59370426 | 1.2284 |
| 15 | 743 | GLQGNALYR∗ | 0.99/0.54484483 | 1.4369 |
aCTLpred, available online at http://www.imtech.res.in/raghava/ctlpred/index.html. bNine amino acids for analysis were used. cThe default artificial neural network (ANN) and support vector machine (SVM) cut-off scores were set 0.51 and 0.36, respectively. ∗ indicates potential antigenic epitopes (threshold = 0.5).