Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2021 Jul 8;12:674783. doi: 10.3389/fgene.2021.674783

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

Copyright © 2021 Scobeyeva, Artyushin, Krinitsina, Nikitin, Antipin, Kuptsov, Belenikin, Omelchenko, Logacheva, Konorov, Samoilov and Speranskaya.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

PMC Copyright notice

Pseudogenization or loss of protein-coding genes heatmap in the plastome of Allioideae (including all three evolution lines of Allium). Taxonomic position of species is denoted at the left side. Species sequenced by our group are marked with (*). (A) Shows Agapanthoideae and Amaryllidoideae subfamily species; (B) shows Nothoscordum bivalve as an outgroup for Allium genus; (C) shows the first evolutionary line Allium species; (D)—the second and (E)—the third. Genes are sorted in natural order in plastid. LSC, large single-copied region; SSC, small single-copied region; IRa and IRb, inverted repeats A and B. The darkest blue marks completely deleted genes; skyblue of varying shades marks pseudogenized genes (depending on the length of the preserved gene fragment); light blue marks true genes (translated without errors). Genes described below in detail are marked with peach color (rps16, rps2, infA, ccsA).