TABLE 3.
Basic information of the TCP gene family in blueberry.
Gene Name | Accession number | Length of amino acid | Chromosome | Chr start | Chr end | MW(Da) | Isoelectric point | Aliphatic index | GRAVY | Subcellular location |
VcTCP1 | VaccDscaff2-snap-gene-363.30 | 521 | 2 | 36372942 | 36374793 | 55282.05 | 8.69 | 55.43 | −0.666 | Nucleus |
VcTCP2 | VaccDscaff3-snap-gene-43.34 | 518 | 3 | 4369247 | 4371162 | 55022.87 | 8.69 | 56.87 | −0.642 | Nucleus |
VcTCP3 | VaccDscaff4-processed-gene-224.7 | 271 | 4 | 22479281 | 22480096 | 30520.6 | 6.34 | 62.25 | −0.818 | Nucleus |
VcTCP4 | VaccDscaff4-processed-gene-248.11 | 264 | 4 | 24835402 | 24836196 | 27988.98 | 9.71 | 66.33 | −0.548 | Nucleus |
VcTCP5 | VaccDscaff4-augustus-gene-340.19 | 328 | 4 | 34030814 | 34032547 | 36796.64 | 8.27 | 55.61 | −1.025 | Nucleus |
VcTCP6 | VaccDscaff4-processed-gene-349.4 | 370 | 4 | 34921314 | 34922426 | 41276.08 | 9.13 | 58.24 | −0.656 | Nucleus |
VcTCP7 | VaccDscaff6-processed-gene-148.0 | 295 | 6 | 14799921 | 14800808 | 32062.43 | 7.24 | 57.22 | −0.724 | Nucleus |
VcTCP8 | VaccDscaff6-processed-gene-185.5 | 342 | 6 | 18562851 | 18563879 | 36003.7 | 6.3 | 51.67 | −0.688 | Nucleus |
VcTCP9 | VaccDscaff7-snap-gene-330.28 | 276 | 7 | 33039338 | 33040490 | 30758.2 | 9.98 | 75.33 | −0.562 | Nucleus |
VcTCP10 | VaccDscaff7-processed-gene-346.11 | 343 | 7 | 34666303 | 34667334 | 38297.32 | 7.14 | 67.87 | −0.799 | Nucleus |
VcTCP11 | VaccDscaff7-processed-gene-411.5 | 308 | 7 | 41170553 | 41171479 | 32829.45 | 7.98 | 68.12 | −0.603 | Nucleus |
VcTCP12 | VaccDscaff9-processed-gene-173.3 | 271 | 9 | 17311444 | 17312259 | 30515.59 | 6.7 | 63.32 | −0.841 | Nucleus |
VcTCP13 | VaccDscaff9-processed-gene-209.15 | 267 | 9 | 20954383 | 20955186 | 28245.25 | 9.71 | 66.33 | −0.542 | Nucleus |
VcTCP14 | VaccDscaff9-processed-gene-315.5 | 328 | 9 | 31562489 | 31564124 | 36890.75 | 8.27 | 55.3 | −1.046 | Nucleus |
VcTCP15 | VaccDscaff9-processed-gene-325.5 | 370 | 9 | 32506674 | 32507786 | 41210.96 | 9.13 | 57.97 | −0.671 | Nucleus |
VcTCP16 | VaccDscaff13-processed-gene-51.0 | 277 | 13 | 5097023 | 5097856 | 29409.67 | 9.3 | 61.77 | −0.646 | Nucleus |
VcTCP17 | VaccDscaff13-processed-gene-86.0 | 332 | 13 | 8593748 | 8594746 | 37184.47 | 7.85 | 71.27 | −0.689 | Nucleus |
VcTCP18 | VaccDscaff13-augustus-gene-211.25 | 358 | 13 | 21133293 | 21135461 | 40445.96 | 9.22 | 66.51 | −0.893 | Nucleus |
VcTCP19 | VaccDscaff13-processed-gene-258.2 | 390 | 13 | 25835319 | 25837106 | 41331.25 | 7.95 | 56.67 | −0.649 | Nucleus |
VcTCP20 | VaccDscaff14-snap-gene-312.22 | 523 | 14 | 31200940 | 31203184 | 55493.27 | 8.69 | 55.22 | −0.666 | Nucleus |
VcTCP21 | VaccDscaff15-processed-gene-260.4 | 444 | 15 | 26063256 | 26064590 | 48913.59 | 8.67 | 56.89 | −0.968 | Nucleus |
VcTCP22 | VaccDscaff16-processed-gene-79.3 | 343 | 16 | 7915380 | 7916411 | 38297.32 | 7.14 | 67.87 | −0.799 | Nucleus |
VcTCP23 | VaccDscaff16-snap-gene-95.39 | 296 | 16 | 9488483 | 9489602 | 33053.77 | 10.02 | 78.45 | −0.474 | Nucleus |
VcTCP24 | VaccDscaff18-processed-gene-313.1 | 686 | 18 | 31354637 | 31355668 | 76576.62 | 7.32 | 67.87 | −0.799 | Nucleus |
VcTCP25 | VaccDscaff19-processed-gene-121.8 | 365 | 19 | 12060048 | 12095062 | 41160.03 | 9.28 | 59.07 | −0.914 | Nucleus |
VcTCP26 | VaccDscaff20-snap-gene-23.40 | 552 | 20 | 2370317 | 2371450 | 59152.97 | 7.13 | 72.25 | −0.369 | Chloroplast. Nucleus |
VcTCP27 | VaccDscaff20-processed-gene-118.24 | 354 | 20 | 11882803 | 11887091 | 39906.4 | 9.31 | 53.47 | −1.033 | Nucleus |
VcTCP28 | VaccDscaff21-processed-gene-72.8 | 310 | 21 | 7278313 | 7279245 | 32514.59 | 5.28 | 73.06 | −0.329 | Nucleus |
VcTCP29 | VaccDscaff21-processed-gene-227.4 | 198 | 21 | 22728228 | 22728824 | 21039.9 | 8.03 | 74.55 | −0.269 | Nucleus |
VcTCP30 | VaccDscaff24-processed-gene-124.3 | 444 | 24 | 12422046 | 12423380 | 48882.62 | 9.02 | 57.32 | −0.952 | Nucleus |
VcTCP31 | VaccDscaff25-snap-gene-361.38 | 528 | 25 | 36090924 | 36093034 | 55879.72 | 8.69 | 55.62 | −0.649 | Nucleus |
VcTCP32 | VaccDscaff26-processed-gene-71.5 | 355 | 26 | 7140969 | 7143147 | 37502.98 | 5.2 | 68.51 | −0.407 | Nucleus |
VcTCP33 | VaccDscaff28-processed-gene-228.2 | 372 | 28 | 22858134 | 22859252 | 41854.53 | 9.01 | 54.84 | −0.947 | Nucleus |
VcTCP34 | VaccDscaff28-processed-gene-231.13 | 368 | 28 | 23127185 | 23130381 | 41617.57 | 8.75 | 61.49 | −0.846 | Nucleus |
VcTCP35 | VaccDscaff28-snap-gene-333.33 | 325 | 28 | 33342992 | 33345897 | 34246.78 | 5.71 | 69.63 | −0.303 | Nucleus |
VcTCP36 | VaccDscaff29-processed-gene-73.2 | 378 | 29 | 7308827 | 7311058 | 40123.07 | 5.72 | 70.24 | −0.354 | Nucleus |
VcTCP37 | VaccDscaff29-processed-gene-216.4 | 199 | 29 | 21606892 | 21607491 | 21050.96 | 7.11 | 77.14 | −0.196 | Nucleus |
VcTCP38 | VaccDscaff30-snap-gene-144.30 | 386 | 30 | 14423911 | 14425903 | 40926.99 | 8.65 | 57.98 | −0.658 | Nucleus |
VcTCP39 | VaccDscaff30-augustus-gene-188.14 | 389 | 30 | 18850412 | 18852920 | 44214.37 | 9.35 | 64.99 | −0.927 | Nucleus |
VcTCP40 | VaccDscaff30-processed-gene-307.4 | 277 | 30 | 30705372 | 30706205 | 29409.67 | 9.3 | 61.77 | −0.646 | Nucleus |
VcTCP41 | VaccDscaff30-processed-gene-322.0 | 333 | 30 | 32192637 | 32193638 | 37610.96 | 7.86 | 68.98 | −0.735 | Nucleus |
VcTCP42 | VaccDscaff31-snap-gene-5.36 | 278 | 31 | 503433 | 504550 | 31042.52 | 9.98 | 74.78 | −0.584 | Nucleus |
VcTCP43 | VaccDscaff32-processed-gene-119.6 | 380 | 32 | 11944947 | 11946089 | 40157.08 | 6.9 | 58.89 | −0.623 | Nucleus |
VcTCP44 | VaccDscaff32-augustus-gene-169.22 | 481 | 32 | 16967184 | 16969298 | 53571.08 | 8.44 | 73.64 | −0.676 | Nucleus |
VcTCP45 | VaccDscaff32-processed-gene-279.5 | 334 | 32 | 27905053 | 27906057 | 37459.86 | 7.76 | 69.67 | −0.701 | Nucleus |
VcTCP46 | VaccDscaff32-snap-gene-314.26 | 364 | 32 | 31384394 | 31385573 | 38996.67 | 9.21 | 69.75 | −0.481 | Nucleus |
VcTCP47 | VaccDscaff33-processed-gene-128.0 | 198 | 33 | 12838946 | 12839542 | 20965.85 | 7.11 | 76.52 | −0.218 | Nucleus |
VcTCP48 | VaccDscaff33-snap-gene-264.40 | 376 | 33 | 26478805 | 26481217 | 40407.54 | 5.73 | 72.69 | −0.395 | Nucleus |
VcTCP49 | VaccDscaff35-processed-gene-150.6 | 264 | 35 | 15016801 | 15017595 | 27888.91 | 9.71 | 66.7 | −0.516 | Nucleus |
VcTCP50 | VaccDscaff35-augustus-gene-247.34 | 328 | 35 | 24765835 | 24767672 | 36908.77 | 7.73 | 55.3 | −1.045 | Nucleus |
VcTCP51 | VaccDscaff35-processed-gene-256.6 | 370 | 35 | 25680771 | 25681883 | 41251.07 | 9.13 | 59.3 | −0.652 | Nucleus |
VcTCP52 | VaccDscaff36-processed-gene-93.1 | 370 | 36 | 9319351 | 9320463 | 41214.01 | 9.13 | 58.78 | −0.66 | Nucleus |
VcTCP53 | VaccDscaff36-augustus-gene-102.19 | 328 | 36 | 10282584 | 10284514 | 36812.68 | 8.27 | 56.8 | −1.007 | Nucleus |
VcTCP54 | VaccDscaff36-processed-gene-208.0 | 263 | 36 | 20792875 | 20793666 | 27960.93 | 9.71 | 65.82 | −0.577 | Nucleus |
VcTCP55 | VaccDscaff37-processed-gene-63.7 | 294 | 37 | 6343639 | 6344523 | 32101.53 | 6.89 | 58.74 | −0.726 | Nucleus |
VcTCP56 | VaccDscaff37-processed-gene-97.9 | 358 | 37 | 9772501 | 9773577 | 37504.42 | 6.34 | 52.68 | −0.645 | Nucleus |
VcTCP57 | VaccDscaff38-processed-gene-183.2 | 359 | 38 | 18300835 | 18301914 | 37561.47 | 6.34 | 52.53 | −0.645 | Nucleus |
VcTCP58 | VaccDscaff38-processed-gene-217.5 | 294 | 38 | 21761403 | 21762287 | 32160.64 | 7.24 | 58.74 | −0.714 | Nucleus |
VcTCP59 | VaccDscaff39-processed-gene-243.3 | 293 | 39 | 24323818 | 24324699 | 31978.36 | 7.24 | 57.61 | −0.728 | Nucleus |
VcTCP60 | VaccDscaff42-processed-gene-10.1 | 277 | 42 | 1047100 | 1048163 | 29409.67 | 9.3 | 64.22 | −0.646 | Nucleus |
VcTCP61 | VaccDscaff42-processed-gene-170.0 | 379 | 42 | 17002895 | 17004034 | 40000.9 | 6.9 | 59.05 | −0.615 | Nucleus |
VcTCP62 | VaccDscaff48-augustus-gene-92.26 | 327 | 48 | 9269735 | 9272947 | 34578.23 | 5.83 | 72.2 | −0.287 | Nucleus |