Eigenvalue estimation in a system with continuously changing parameters. We compare the estimated eigenvalue from Jacobian reconstruction in a sliding window to the analytic ground truth for a predator–prey system on six geographical patches close to a Turing bifurcation. The panels show the same result, however the estimate is placed at the end of the observation window (a) or in the centre (b). For large ϕ, the steady state described by the analytical eigenvalues is unstable (greyed region) and hence the reconstruction yields eigenvalues of a different state. The width of the sliding window is indicated on the left (shaded blue left edge). (Parameters: ϕ, γ is changed from 0.70, 0.35 to 0.75, 0.30).(Online version in colour.)