Table 1.
Taxa used in this study.
| Species | Collection Number | Country | GenBank Accession Number ITS | Reference | GenBank Accession Number Beta-Tubulin | Reference | GenBank Accession Number Alpha-Actin | Reference |
|---|---|---|---|---|---|---|---|---|
| Astrocystis bambusae | HAST 89021904 | Taiwan | - | - | GQ495942 | [2] | GQ449239 | [2] |
| A. mirabilis | HAST 94070803 | Taiwan | - | - | GQ495941 | [2] | GQ449238 | [2] |
| A. sublimbata | HAST 89032207 | Taiwan | - | - | GQ495940 | [2] | GQ449236 | [2] |
| Kretzschmaria clavus | JDR 114 | French Guiana | - | - | EF025611 | [2] | EF025596 | [2] |
| K. guyanensis | HAST 89062903 | Taiwan | GU300079 | [2] | GQ478214 | [2] | GQ408901 | [2] |
| K. sandvicensis | JDR 113 | USA, Hawaiian Islands | - | - | GQ478211 | [2] | GQ398234 | [2] |
| Nemania bipapillata | HAST 90080610 | Taiwan | - | - | GQ470221 | [2] | GQ389693 | [2] |
| N. diffusa | HAST 91020401 | Taiwan | - | - | GQ470220 | [2] | GQ389692 | [2] |
| N. illita | JDR 236 | USA | - | - | EF025608 | [2] | EF025593 | [2] |
| Poronia pileiformis | WSP 88113001 | Taiwan | GU324760 | [2] | GQ502720 | [2] | GQ455449 | [2] |
| Rosellinia buxi | JDR 99 | France | - | - | GQ470228 | [2] | GQ398228 | [2] |
| R. necatrix | HAST 89062904 | Taiwan | - | - | EF025603 | [2] | EF025588 | [2] |
| Xylaria acuminatilongissima | HAST 623 | Taiwan | EU178738 | [6] | GQ502711 | [2] | GQ853046 | [2] |
| X. adscendens | JDR 865 | Thailand | GU322432 | [2] | GQ487709 | [2] | GQ438746 | [2] |
| X. apoda | HAST 90080804 | Taiwan | GU322437 | [2] | GQ495930 | [2] | GQ438751 | [2] |
| X. arbuscula var. plenofissura | HAST 93082814 | Taiwan | GU339495 | [2] | GQ478225 | [2] | GQ421285 | [2] |
| X. atrodivaricata | HAST 95052001 | Taiwan | EU178739 | [6] | GQ502713 | [2] | GQ853048 | [2] |
| X. atrosphaerica | HAST 91111214 | Taiwan | GU322459 | [2] | GQ495953 | [2] | GQ452363 | [2] |
| X. bambusicola | JDR 162 | Thailand | GU300088 | [2] | GQ478223 | [2] | GQ408910 | [2] |
| X. brunneovinosa | HAST 720 | Taiwan | EU179862 | [6] | GQ502706 | [2] | GQ853041 | [2] |
| X. chaiyaphumensis | SWUF16-04.1 | Thailand | MT622777 | This study | - | - | - | - |
| X. chaiyaphumensis | SWUF16-11.4 | Thailand | MT622776 | This study | MW459236 | This study | MW459213 | This study |
| X. chaiyaphumensis | SWUF17-15.1 | Thailand | MT622774 | This study | - | - | MW459214 | This study |
| X. chaiyaphumensis | SWUF17-49.2 | Thailand | MT622775 | This study | - | - | MW459215 | This study |
| X. cirrata | HAST 664 | Taiwan | EU179863 | [6] | GQ502707 | [2] | GQ853042 | [2] |
| X. coccophora | HAST 786 | French Guiana | GU300093 | [2] | GQ487701 | [2] | GQ421289 | [2] |
| X. conica | SWUF18-4.3 | Thailand | MT622786 | This study | - | - | MW459223 | This study |
| X. conica | SWUF18-4.4 | Thailand | MT622787 | This study | MW459243 | This study | MW459224 | This study |
| X. coprinicola | 1145 | China | HM585020 | [23] | HM585018 | [23] | HM585017 | [23] |
| X. crozonensis | HAST 398 | France | GU324748 | [2] | GQ502697 | [2] | GQ455441 | [2] |
| X. cubensis | GENT 159 | Papua New Guinea | - | - | GQ502702 | [2] | GQ455446 | [2] |
| X. cubensis | HAST 515 | French West Indies | GU373810 | [2] | GQ502701 | [2] | GQ455445 | [2] |
| X. culleniae | JDR 189 | Thailand | GU322442 | [2] | GQ495935 | [2] | GQ438756 | [2] |
| X. curta | HAST 92092022 | Taiwan | GU322443 | [2] | GQ495936 | [2] | GQ438757 | [2] |
| X. escharoidea | HAST 658 | Taiwan | EU179864 | [6] | GQ502709 | [2] | GQ853044 | [2] |
| X. escharoidea | CLZhao TJ-1 | China | MK343687 | Unpublished | - | - | - | - |
| X. escharoidea | CLZhao TJ-2 | China | MK343688 | Unpublished | - | - | - | - |
| X. escharoidea | CLZhao TJ-3 | China | MK343689 | Unpublished | - | - | - | - |
| X. escharoidea | SWFU000021 | China | MK862248 | Unpublished | - | - | - | - |
| X. escharoidea | 274-CW107 | China | KU194333 | Unpublished | - | - | - | - |
| X. escharoidea | TF18 | China | MN509048 | Unpublished | - | - | - | - |
| X. escharoidea | Y-4 | China | KC462194 | Unpublished | - | - | - | - |
| X. cf. escharoidea | SWUF17-35.1 | Thailand | MT622792 | This study | MW459227 | This study | MW459200 | This study |
| X. cf. escharoidea | SWUF17-38.1 | Thailand | MT622793 | This study | - | - | - | - |
| X. cf. escharoidea | SWUF17-39.1 | Thailand | MT622794 | This study | MW459228 | This study | MW459201 | This study |
| X. cf. escharoidea | SWUF17-39.2 | Thailand | MT622795 | This study | - | - | - | - |
| X. fimbriata | HAST 491 | French West Indies | GU324753 | [2] | GQ502705 | [2] | GQ853040 | [2] |
| X. fulvescens | SWUF17-27.2 | Thailand | MT622780 | This study | MW459238 | This study | MW459218 | This study |
| X. griseosepiacea | HAST 641 | Taiwan | EU179865 | [6] | GQ502714 | [2] | GQ853049 | [2] |
| X. hypoxylon | HAST 95082001 | Taiwan | GU300095 | [2] | GQ487703 | [2] | GQ427195 | [2] |
| X. ianthinovelutina | HAST 553 | French West Indies | GU322441 | [2] | GQ495934 | [2] | GQ438755 | [2] |
| X. insolita | HAST 99090301-1251 | Taiwan | MN655979 | [8] | MN656983 | [8] | MN656985 | [8] |
| X. intracolorata | HAST 90080402 | Taiwan | GU324741 | [2] | GQ502690 | [2] | GQ452375 | [2] |
| X. intraflava | HAST 725 | Taiwan | EU179866 | [6] | GQ502718 | [2] | GQ853053 | [2] |
| X. ischnostroma | SWUF18-22.1 | Thailand | MT622788 | This study | MW459244 | This study | MW459225 | This study |
| X. juruensis | HAST 92042501 | Taiwan | GU322439 | [2] | GQ495932 | [2] | GQ438753 | [2] |
| X. laevis | HAST 95,072,910 | Taiwan | GU324747 | [2] | GQ502696 | [2] | GQ455440 | [2] |
| X. luteostromata var. macrospora | HAST 508 | French West Indies | GU324739 | [2] | GQ502688 | [2] | GQ452373 | [2] |
| X. margaretae | SWUF17-34.1 | Thailand | MT622778 | This study | - | - | MW459216 | This study |
| X. margaretae | SWUF17-34.2 | Thailand | MT622779 | This study | MW459237 | This study | MW459217 | This study |
| X. minima | SWUF18-3.2 | Thailand | MT622789 | This study | MW459245 | This study | MW459226 | This study |
| X. multiplex | HAST 580 | French West Indies | GU300098 | - | GQ487705 | [2] | GQ427198 | [2] |
| X. nigripes | HAST 653 | Taiwan | GU324755 | [2] | GQ502710 | [2] | GQ853045 | [2] |
| X. nigripes | Xn1 | China | MK748600 | Unpublished | - | - | - | - |
| X. nigripes | Xn-6 | China | JQ967448 | Unpublished | - | - | - | - |
| X. nigripes | Xn-7 | China | JQ979095 | Unpublished | - | - | - | - |
| X. nigripes | CWF | Taiwan | KJ627787 | Unpublished | - | - | - | - |
| X. nigripes | 420526MF0342 | China | MG712340 | Unpublished | - | - | - | - |
| X. nigripes | Hf-1A | Taiwan | JQ927570 | Unpublished | - | - | - | - |
| X. nigripes | 4-29 | China | HM050414 | Unpublished | - | - | - | - |
| X. nigripes | ZD17052101 | China | MN523323 | Unpublished | - | - | - | - |
| X. cf. nigripes | SWUF17-31.2 | Thailand | MT622790 | This study | MW459229 | This study | MW459202 | This study |
| X. cf. nigripes | SWUF17-36.1 | Thailand | MT622791 | This study | - | - | MW459203 | This study |
| X. ochraceostroma | HAST 401 | Taiwan | EU179869 | [6] | GQ502717 | [2] | GQ853052 | [2] |
| X. oligotoma | HAST 784 | French Guiana | GU300092 | [2] | GQ487700 | [2] | GQ421288 | [2] |
| X. ophiopoda | HAST 93082805 | Taiwan | GU322461 | [2] | GQ452365 | [2] | GQ495955 | [2] |
| X. plebeja | HAST 91122401 | Taiwan | GU324740 | [2] | GQ502689 | [2] | GQ452374 | [2] |
| X. polymorpha | JDR1012 | USA | GU322460 | [2] | GQ495954 | [2] | GQ452364 | [2] |
| X. reinkingii var. microspora | SWUF17-19.1 | Thailand | MT622769 | This study | MW459234 | This study | MW459209 | This study |
| X. ripicola | KA11-0060-1 | South Korea | NR153251 | [24] | - | - | - | - |
| X. ripicola | KA11-0060-2 | South Korea | KM817200 | [24] | - | - | - | - |
| X. siamensis | SWUF17-20.2 | Thailand | MT622765 | This study | MW459233 | This study | MW459208 | This study |
| X. siamensis | SWUF17-20.3 | Thailand | MT622766 | This study | - | - | - | - |
| X. siamensis | SWUF17-20.4 | Thailand | MT622767 | This study | - | - | - | - |
| X. siamensis | SWUF17-20.6 | Thailand | MT622768 | This study | - | - | - | - |
| X. sihanonthii | SWUF18-5.1 | Thailand | MT622784 | This study | MW459241 | This study | MW459221 | This study |
| X. sihanonthii | SWUF18-1.3 | Thailand | MT622785 | This study | MW459242 | This study | MW459222 | This study |
| X. striata | HAST 304 | Taiwan | GU300089 | [2] | GQ478224 | [2] | GQ421284 | [2] |
| X. subescharoidea | HAST 660 | Taiwan | GU324754 | [2] | GQ502708 | [8] | GQ853043 | [8] |
| X. subescharoidea | HAST 99060401-1188 | Taiwan | MN655980 | [8] | MN656984 | [8] | MN656986 | [8] |
| X. subintraflava | SWUF16-4.3 | Thailand | MT622762 | This study | MW459230 | This study | MW459204 | This study |
| X. subintraflava | SWUF16-11.1 | Thailand | MT622763 | This study | - | - | MW459205 | This study |
| X. subintraflava | SWUF17-9.2 | Thailand | MT622758 | This study | - | - | - | - |
| X. subintraflava | SWUF17-13.1 | Thailand | MT622759 | This study | - | - | - | - |
| X. subintraflava | SWUF17-22.2 | Thailand | MT622764 | This study | MW459231 | This study | MW459206 | This study |
| X. subintraflava | SWUF17-24.2 | Thailand | MT622757 | This study | MW459232 | This study | MW459207 | This study |
| X. subintraflava | SWUF18-9.1 | Thailand | MT622760 | This study | - | - | - | - |
| X. subintraflava | SWUF18-9.2 | Thailand | MT622761 | This study | - | - | - | - |
| X. terricola | YMJ 1375 | Taiwan | MF577042 | [25] | MF577044 | [25] | MF577045 | [25] |
| X. thienhirunae | SWUF16-6.2 | Thailand | MT622770 | This study | MW459235 | This study | MW459210 | This study |
| X. thienhirunae | SWUF16-7.2 | Thailand | MT622772 | This study | - | - | - | - |
| X. thienhirunae | SWUF16-10.1 | Thailand | MT622773 | This study | - | - | MW459211 | This study |
| X. thienhirunae | SWUF17-44.1 | Thailand | MT622771 | This study | - | - | MW459212 | This study |
| X. venustula | HAST 88113002 | Taiwan | GU300091 | [2] | GQ487699 | [2] | GQ421287 | [2] |
| X. vinacea | SWUF18-2.1 | Thailand | MT622781 | This study | MW459239 | This study | MW459219 | This study |
| X. vinacea | SWUF18-2.3 | Thailand | MT622782 | This study | - | - | - | - |
| X. vinacea | SWUF18-2.10 | Thailand | MT622783 | This study | MW459240 | This study | MW459220 | This study |
| X. sp. 1 | HAST 642 | Taiwan | GU324759 | [2] | GQ502719 | [2] | GQ853054 | [2] |
| X. sp. 3 | HAST 722 | Taiwan | GU324756 | [2] | GQ502712 | [2] | GQ853047 | [2] |
| X. sp. 4 | HAST 646 | Taiwan | GU324757 | [2] | GQ502715 | [2] | GQ853050 | [2] |
| X. sp. 5 | HAST 650 | Taiwan | GU324758 | [2] | GQ502716 | [2] | GQ853051 | [2] |
| Xylaria sp. | ASMC3 | Vietnam | EU164404 | [22] | - | - | - | - |
| Xylaria sp. | AAG5 | Africa | EU164400 | [22] | - | - | - | - |
| Xylaria sp. | HNHB | China | FN812862 | Unpublished | - | - | - | - |
| Xylaria sp. | D12 | China | KC414236 | Unpublished | - | - | - | - |
| Xylaria sp. | TF37 | China | MN526593 | Unpublished | - | - | - | - |
| Xylaria sp. | 4-E7-2 | China | FN812842 | Unpublished | - | - | - | - |
| Xylariaceae sp. | 342.D | South Africa | FJ425676 | [26] | - | - | - | - |
| Xylariaceae sp. | 341 | South Africa | FJ425675 | [26] | - | - | - | - |