Table 2.
Genome properties of Ca. N. mikurensis compared with that of other members of the family Anaplasmataceae.
| Property | Organism | ||||
|---|---|---|---|---|---|
| Ca. Neoehrlichia mikurensis SE24 | Ca. Neoehrlichia lotoris | Ehrlichia ruminantium | Ehrlichia chaffeensis | Anaplasma phagocytophilum | |
| Accession number | CP053279 | NZ_LANX00000000 | NC_005295 | NC_007799 | NC_007797 |
| Size (bp) | 1,112,301 | 1,268,660 | 1,516,355 | 1,176,248 | 1,471,282 |
| GC content (%) | 26.9 | 27.7 | 27.5 | 30.1 | 41.6 |
| Genes, total (n) | 900 | 953 | 987 | 965 | 1152 |
| CDS, total (n) | 860 | 912 | 944 | 922 | 1108 |
| CDS with protein (n) | 845 | 908 | 919 | 886 | 1105 |
| Average CDS length (bp) | 960 | 1016 | 1007 | 995 | 929 |
| Assigned functions (n) | 776 | NR | 758 | 604 | 747 |
| Unknown functions (n) | 90 | NR | NR | 85 | 77 |
| Pseudogenes (n) | 15 | 4 | 25 | 36 | 103 |
| RNA genes (n) | 40 | 41 | 43 | 43 | 44 |
| rRNAs (n) | 3 | 3 | 3 | 3 | 3 |
| tRNAs (n) | 34 | 35 | 36 | 37 | 37 |
| ncRNAs (n) | 3 | 3 | 4 | 3 | 4 |
| Reference | This study | Daugherty, S.C et al. Direct submission | Collins et al. [44] | Dunning Hotopp et al. [26] | Dunning Hotopp et al. [26] |
Bp, base pair; CDS, coding sequence; rRNA, ribosomal ribonucleic acid; tRNA, transfer ribonucleic acid; ncRNA, non-coding ribonucleic acid; NR, not recorded.