| 2PGA | 2-phosphoglycerate |
| 3PGA | 3-phosphoglycerate |
| 13BPGA | 1,3-bisphosphoglycerate |
| A | Adenine |
| ALE | Adaptive laboratory evolution |
| BSA | Bovine serum albumin |
| CAZymes | Carbohydrate-active enzymes |
| CBM | Carbohydrate-binding module |
| CBP | Cellobiose phosphorylase |
| CDS | Coding sequence |
| CGs | Cellobiose-grown cells |
| CMC | Carboxymethylcellulose |
| DE | Differential expression |
| DEGs | Differentially expressed genes |
| FAs | Fructose-adapted cells |
| Fd | Ferredoxin |
| Fru | Fructose |
| Fru6P | Fructose 6-phosphate |
| Fru16BP | Fructose 1,6-biphosphate |
| FBA | Fructose-bisphosphate aldolase |
| G | Guanine |
| Glc | Glucose |
| GAP | Glyceraldehyde 3-phosphate |
| GAs | Glucose-adapted cells |
| Glc1P | Glucose 1-phosphate |
| Glc6P | Glucose 6-phosphate |
| GCK | Glucokinase |
| GH | Glycoside hydrolase |
| GHnc | Glycoside hydrolase family “Non classified” |
| GA3P | Glyceraldehyde 3-phosphate |
| GTP | Guanosine-5′-triphosphate |
| indel | Insertion/Deletion |
| ITP | Inosine triphosphate |
| Mal | Malate |
| MDH | Malate dehydrogenase |
| ME | Malic enzyme |
| nbdA | ATP-binding protein |
| NGS | Next-generation sequencing |
| non-syn | Nonsynonymous |
| OAA | Oxaloacetate |
| ODC | Oxaloacetate decarboxylase |
| PGI | Glucose-6-phosphate isomerase |
| PEP | Phosphoenolpyruvate |
| PFK | Phosphofructokinase |
| PGAM | Phosphoglycerate mutase |
| PPDK | Pyruvate phosphate dikinase |
| PYK | Pyruvate kinase |
| SNVs | Single nucleotide variations |
| syn | Synonymous |