Table 1.
General genomic features of Sphingobacterium S2, P. aeruginosa S3 and Geobacillus EC-3.
| Features | Pseudomonas S3 | Sphingobacterium S2 | Geobacillus EC-3 | Database 1 |
|---|---|---|---|---|
| Contigs | 63 | 87 | 111 | PATRIC |
| G + C Content (%) | 66.26 | 43.66 | 52.18 | PATRIC |
| Plasmids | ND 2 | ND | ND | PATRIC |
| Contig L50 | 8 | 9 | 12 | PATRIC |
| Genome Length | 6,509,961 bp | 5,445,390 bp | 3,397,712 bp | PATRIC |
| Contig N50 | 273,159 bp | 267,833 bp | 90,542 bp | PATRIC |
| Longest Contig | 658,980 bp | 434,944 bp | 321,190 bp | PATRIC |
| Chromosomes | ND2 | ND | ND | PATRIC |
| CDS | 6239 | 4951 | 3790 | PATRIC |
| tRNA | 60 | 72 | 87 | PATRIC |
| Repeat Regions | 60 | 0 | 138 | PATRIC |
| rRNA | 7 | 3 | 11 | PATRIC |
| Hypothetical proteins | 1307 | 2087 | 984 | PATRIC |
| Proteins with functional assignments | 4932 | 2864 | 2806 | PATRIC |
| Proteins with EC number assignments | 1287 | 933 | 989 | PATRIC |
| Proteins with GO assignments | 1091 | 806 | 750 | PATRIC |
| Proteins with Pathway assignments | 970 | 693 | 678 | PATRIC |
| Antibiotic Resistance | 51 | 0 | 0 | CARD |
| Antibiotic Resistance | 5 | 0 | 0 | NDARO |
| Antibiotic Resistance | 100 | 28 | 32 | PATRIC |
| Drug Target | 67 | 0 | 25 | DrugBank |
| Drug Target | 10 | 0 | 1 | TTD |
| Transporter | 186 | 2 | 18 | TCDB |
| Virulence Factor | 1 | 0 | 2 | PATRIC_VF |
| Virulence Factor | 233 | 0 | 0 | VFDB |
| Virulence Factor | 86 | 0 | 2 | Victors |
1 Database used for identifications. 2 Not Determined.