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. 2021 Jul 16;22(14):7612. doi: 10.3390/ijms22147612
GWAS Genome-wide association studies
LD Linkage disequilibrium
SNPs Single nucleotide polymorphisms
INDELs Insertion/deletion polymorphisms
ENCODE Encyclopedia of DNA Elements
TFs Transcription factors
TSSs Transcription start sites
CTCF CCCTC-binding factor
TADs Topologically associated domains
NPCs Neural progenitor cells
FAC/NS Fluorescence assisted cell/nuclei sorting
RNAPII RNA polymerases II
DHSs DNase I hypersensitive sites
DNase-seq DNase I hypersensitive sites sequencing
MNase-seq Micrococcal nuclease digestion of chromatin followed by sequencing
FAIRE-seq Formaldehyde-assisted isolation of regulatory elements with sequencing
ATAC-seq Assay for transposase-accessible chromatin coupled to sequencing
ChIP-seq Chromatin immunoprecipitation with sequencing
CUT&RUN Cleavage under targets and release using nuclease
DamID DNA adenine methyltransferase (DAM)-identification
ChIA-PET Chromatin interaction analysis by paired-end tag sequencing
PLAC-seq Proximity ligation-assisted ChIP-Seq