Table 5.
Genes | Positive Selection Sites | Amino Acids | BEB Value | Feature Key * | Description | |
---|---|---|---|---|---|---|
Foreground | Background | |||||
COX1 | 408 | N | Q/K | 0.988 * | Domain | COX1 |
475 | A | S | 0.979 * | Domain | COX1 | |
Cyt b | 62 | T | L | 0.977 * | Domain | CYTB_NTER |
358 | T/I | V/T/I | 0.954 * | Transmembrane | Helical | |
ND1 | 173 | Y | E/K/Q | 0.989 * | / | / |
189 | S | A/T | 0.983 * | Transmembrane | Helical | |
ND2 | 148 | S/G | P/S | 0.995 ** | Transmembrane | Helical |
153 | T/S | F | 0.983 * | Transmembrane | Helical | |
197 | N | S/P/N | 0.979 * | Domain | Proton_antipo_M | |
318 | G/N | S/L/T/A | 0.983 * | / | / | |
341 | S | S/P/T/L | 0.991 ** | / | / | |
ND3 | 85 | Q | A/N/S/T | 0.970 * | / | / |
ND4 | 183 | S | G/S/K | 0.962 * | Transmembrane | Helical |
189 | G | M/L | 0.986 * | Transmembrane | Helical | |
ND5 | 25 | T | L | 0.971 * | Transmembrane | Helical |
29 | L/A | S | 0.964 * | Transmembrane | Helical | |
179 | E/H | S/G/T | 0.969 * | Transmembrane | Helical | |
337 | S | S/N/I/T | 0.984 * | Domain | Proton_antipo_M | |
468 | L | S/V/I/A | 0.989 * | Transmembrane | Helical | |
490 | F | N/H/Q/G/S | 0.978 * | Domain | NADH5_C | |
ND6 | 3 | T | L/F/M | 0.976 * | / | / |
12 | L | T/I | 0.996 ** | Transmembrane | Helical | |
28 | I/V | C/S/I/V | 0.985 * | Transmembrane | Helical | |
110 | S | E/D | 0.996 ** | / | / | |
111 | D | Q | 0.984 * | / | / | |
125 | P | N/T/I/G | 0.993 ** | Transmembrane | Helical | |
158 | N | Q/N | 0.981 * | Transmembrane | Helical |
Note: * and ** indicate BEB values > 0.95 and > 0.99, respectively.