Table 1.
Frequency of mobile genetic elements in 1101 genomes of C. difficile available in the GenBank database 1,2.
| Mobile Genetic Element |
Genomes in Which MGEs Were Identified (n) |
Genomes with MGEs in Which at Least One AMR Gene Was Identified (n) |
|---|---|---|
| Tn6009 | 408 | 71 |
| Tn6105 | 269 | 31 |
| CTn7 | 248 | 85 |
| Tn6192 | 214 | 94 |
| Tn6194 | 108 | 104 |
| IS256 | 93 | 35 |
| CTn4 | 38 | 13 |
| Tn6106 | 31 | 10 |
| CTn1 | 21 | 10 |
| Tn6218 | 21 | 21 |
| CTn6 | 21 | 5 |
| CTn5 | 20 | 8 |
| Tn4453 | 13 | 13 |
| Tn5397 | 9 | 9 |
| Tn6073 | 9 | 3 |
| CTn2 | 6 | 0 |
| Tn6215 | 6 | 6 |
| Tn5801 (B6) | 5 | 5 |
| MTnSag1 | 4 | 2 |
| Tn6164 | 4 | 4 |
| ISMlu7 | 3 | 0 |
| Tn5398 | 3 | 3 |
| Tn6104 | 2 | 0 |
| IS5 | 1 | 0 |
| ISAba34 | 1 | 0 |
| ISClte3 | 1 | 0 |
| ISEc36 | 1 | 0 |
| ISEfa9 | 1 | 0 |
| ISRgn1 | 1 | 0 |
| ISRgn2 | 1 | 0 |
| Tn6107 | 1 | 0 |
| Tn6263 | 1 | 1 |
1 A total of 2190 genomes were evaluated, among which, in 1101, mobile genetic elements were found; 2 details of all abbreviations in Appendix A.