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. 2021 Jul 9;9(7):1474. doi: 10.3390/microorganisms9071474

Table 1.

Primer pairs, annealing temperatures, and expected length of amplicons.

Genetic Marker Primers (Forward, Reverse) Nucleotide Sequence (5′–3′) Annealing Temperature Product Size Reference
18S rDNA Bc_F1 CGTAGTTGTATTTTTGCGT 50 °C ≈430 bp [33]
GR2 CCAAAGACTTTGATTTCTCTC
Bc_F2 CATTTGGTTGGTTATTTCGTTTT 53 °C 376 bp
Bc_R1 GTTCCTGAAGGGGTCAAAAA
18S rDNA BT1F GGTTGATCCTGCCAGTAGT 65 °C–55 °C ≈1730 bp Modified after [8]
BT outer R GGAAACCTTGTTACGACTTCTC
Piro0F2 GCCAGTAGTCATATGCTTGTCTTA 65 °C–55 °C ≈1670 bp
BT inner R TTCTCCTTCCTTTAAGTGATAAG
Cytb Bc_cytb_F1 TGGTCWTGGTATTCWGGAATG 50 °C ≈700 bp [34]
Bc_cytb_R1 AAGMYARTCTYCCTAAACATCC
Bc_cytb_F2 RATKAGYTAYTGGGGAGC 48 °C ≈580 bp
Bc_cytb_R2 GCTGGWATCATWGGTATAC
COI Bab_For1 ATWGGATTYTATATGAGTAT 45 °C 1250 bp [34]
Bab_Rev1 ATAATCWGGWATYCTCCTTGG
Bab_For2 TCTCTWCATGGWTTAATTATGATAT 49 °C 980 bp
Bab_Rev2 TAGCTCCAATTGAHARWACAAAGTG