Table 4.
Average binding free energy of the representative configurations of the different compounds with the k-RAS G4 (PDB ID: PDB 5i2v). Fifty snapshots were used in the calculations.
| Ligand | Average Binding Free Energy (kJ/mol) | Van der Waals Energy (kJ/mol) | Electrostatic Energy (kJ/mol) | Polar Solvation Energy (kJ/mol) | SASA Energy (kJ/mol) |
|---|---|---|---|---|---|
| 2a | −207 ± 8 | −240 ± 6 | −560 ± 4 | 612 ± 13 | −19 ± 1 |
| 2b | −215 ± 14 | −220 ± 5 | −518 ± 4 | 543 ± 17 | −19 ± 1 |
| 2c | −171 ± 8 | −248 ± 8 | −553 ± 4 | 649 ± 9 | −19 ± 1 |
| 2d | −203 ± 7 | −217 ± 7 | −521 ± 5 | 551 ± 14 | −17 ± 1 |